Miyakogusa Predicted Gene
- Lj0g3v0249129.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0249129.1 tr|Q9LEU5|Q9LEU5_ARATH Cylicin-related protein
OS=Arabidopsis thaliana GN=T30N20_220 PE=2
SV=1,53.85,3e-19,Tudor/PWWP/MBT,NULL; no description,NULL;
LBR_tudor,Lamin-B receptor of TUDOR domain; ANDROGEN
INDUC,NODE_25720_length_605_cov_193.783478.path2.1
(342 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW627902 weakly similar to UniRef100_A7P5X1 Cluster: Ch... 553 e-157
gnl|LJGI|TC68022 weakly similar to UniRef100_A7P5X1 Cluster: Chr... 125 2e-28
>gnl|LJGI|BW627902 weakly similar to UniRef100_A7P5X1 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 489
Score = 553 bits (279), Expect = e-157
Identities = 279/279 (100%)
Strand = Plus / Plus
Query: 1 atgacggtgtattctccaaggtctggtacaaaatccactaaatctgaaaatacagaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 atgacggtgtattctccaaggtctggtacaaaatccactaaatctgaaaatacagaggag 270
Query: 61 attcccctgacaagtgcaaagaggaaacgtactccaggaaaagaaaaagagtctgataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 attcccctgacaagtgcaaagaggaaacgtactccaggaaaagaaaaagagtctgataca 330
Query: 121 aagaaatatggtgaaaaccttgttggtttacgggttaaagtttggtggcctgaggatcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aagaaatatggtgaaaaccttgttggtttacgggttaaagtttggtggcctgaggatcgt 390
Query: 181 gagttttacacgggtgtcgttaattcatttgattccgccagaaagaagcacaaggtgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gagttttacacgggtgtcgttaattcatttgattccgccagaaagaagcacaaggtgttg 450
Query: 241 tatgatgatggtgatgaagaaacattaaatcttagggag 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tatgatgatggtgatgaagaaacattaaatcttagggag 489
>gnl|LJGI|TC68022 weakly similar to UniRef100_A7P5X1 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 908
Score = 125 bits (63), Expect = 2e-28
Identities = 175/211 (82%), Gaps = 1/211 (0%)
Strand = Plus / Plus
Query: 79 aagaggaaacgtactccaggaaaagaaaaagagtctgatacaaagaaatatggtgaaaac 138
||||||||||||||||||||||||||||| || ||||||| |||||||||||||| |
Sbjct: 475 aagaggaaacgtactccaggaaaagaaaatgaatctgataacaagaaatatggtgacgag 534
Query: 139 cttgttggtttacgggttaaagtttggtggcctgaggatcgtgagttttacacgggtgtc 198
|||||||| || ||||| ||||||||||| |||||| |||||||| ||| |
Sbjct: 535 cttgttggaacccgtgttaaggtttggtggccagaggataaagagttttatgaaggtatt 594
Query: 199 gttaattcatttgattccgccagaaagaagcacaa-ggtgttgtatgatgatggtgatga 257
|| |||| |||||||| |||| ||||||||||| ||| |||||||||||||||||| |
Sbjct: 595 gtcgattcttttgattcttccagtaagaagcacaagggtcttgtatgatgatggtgatca 654
Query: 258 agaaacattaaatcttagggaggaaaaatgg 288
|||||||||||||||| |||||||||||
Sbjct: 655 ggaaacattaaatcttaaaaaggaaaaatgg 685