Miyakogusa Predicted Gene
- Lj0g3v0248989.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0248989.1 CUFF.16266.1
(433 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC594505 151 4e-36
gnl|LJGI|DC594173 151 4e-36
gnl|LJGI|BW596036 151 4e-36
gnl|LJGI|DC594090 homologue to UniRef100_A4M2J8 Cluster: Squalen... 105 2e-22
gnl|LJGI|FS322393 homologue to UniRef100_A4M2J8 Cluster: Squalen... 100 1e-20
gnl|LJGI|AV777990 similar to UniRef100_Q4RFJ5 Cluster: Chromosom... 100 1e-20
gnl|LJGI|TC61586 98 5e-20
gnl|LJGI|GO016292 similar to UniRef100_Q6BXW0 Cluster: Debaryomy... 92 3e-18
gnl|LJGI|CB826921 similar to UniRef100_UPI00006A06AA Cluster: Le... 92 3e-18
gnl|LJGI|TC66565 similar to UniRef100_Q6BXW0 Cluster: Debaryomyc... 92 3e-18
gnl|LJGI|TC65808 similar to UniRef100_Q92E97 Cluster: Lin0563 pr... 60 1e-08
>gnl|LJGI|DC594505
Length = 357
Score = 151 bits (76), Expect = 4e-36
Identities = 127/143 (88%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 288 catctgctcccgtcaaatcgcttctctgcttcattcaattgcatcatcgtcgacgcttgc 347
||||||||||||||||||||| ||||||| | | | |||||||||||| ||||||| |
Sbjct: 46 catctgctcccgtcaaatcgc--ctctgctacctccgattgcatcatcgccgacgctcac 103
Query: 348 cttctcttccgtgttcaaggaggtttcgctcgccggaaatgggggaaccagccatatttc 407
|||| ||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||
Sbjct: 104 cttcccttccgtgttcaaggaggtttagctcgctggaactggtggaaccagccatatttc 163
Query: 408 gacagctacctccattcactgtt 430
||||||| ||| |||||||||||
Sbjct: 164 gacagctcccttcattcactgtt 186
>gnl|LJGI|DC594173
Length = 570
Score = 151 bits (76), Expect = 4e-36
Identities = 127/143 (88%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 288 catctgctcccgtcaaatcgcttctctgcttcattcaattgcatcatcgtcgacgcttgc 347
||||||||||||||||||||| ||||||| | | | |||||||||||| ||||||| |
Sbjct: 19 catctgctcccgtcaaatcgc--ctctgctacctccgattgcatcatcgccgacgctcac 76
Query: 348 cttctcttccgtgttcaaggaggtttcgctcgccggaaatgggggaaccagccatatttc 407
|||| ||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||
Sbjct: 77 cttcccttccgtgttcaaggaggtttagctcgctggaactggtggaaccagccatatttc 136
Query: 408 gacagctacctccattcactgtt 430
||||||| ||| |||||||||||
Sbjct: 137 gacagctcccttcattcactgtt 159
>gnl|LJGI|BW596036
Length = 485
Score = 151 bits (76), Expect = 4e-36
Identities = 127/143 (88%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 288 catctgctcccgtcaaatcgcttctctgcttcattcaattgcatcatcgtcgacgcttgc 347
||||||||||||||||||||| ||||||| | | | |||||||||||| ||||||| |
Sbjct: 32 catctgctcccgtcaaatcgc--ctctgctacctccgattgcatcatcgccgacgctcac 89
Query: 348 cttctcttccgtgttcaaggaggtttcgctcgccggaaatgggggaaccagccatatttc 407
|||| ||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||
Sbjct: 90 cttcccttccgtgttcaaggaggtttagctcgctggaactggtggaaccagccatatttc 149
Query: 408 gacagctacctccattcactgtt 430
||||||| ||| |||||||||||
Sbjct: 150 gacagctcccttcattcactgtt 172
>gnl|LJGI|DC594090 homologue to UniRef100_A4M2J8 Cluster: Squalene-hopene cyclase;
n=1; Geobacter bemidjiensis Bem|Rep: Squalene-hopene
cyclase -, partial (2%)
Length = 503
Score = 105 bits (53), Expect = 2e-22
Identities = 96/110 (87%), Gaps = 4/110 (3%)
Strand = Plus / Plus
Query: 305 tcgcttctctgcttcattcaattgcatcatcgtcgacgcttgccttctcttccgtgttca 364
|||| ||||| |||| ||| |||||||||||| |||||||||| ||||||| |||
Sbjct: 57 tcgcgtctctacttccttcgattgcatcatcgctgacgcttgcc----gttccgtgctca 112
Query: 365 aggaggtttcgctcgccggaaatgggggaaccagccatatttcgacagct 414
||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 113 aggagatttcgctcgccggaaatggaggaaccagccatatttcgacagct 162
>gnl|LJGI|FS322393 homologue to UniRef100_A4M2J8 Cluster: Squalene-hopene cyclase;
n=1; Geobacter bemidjiensis Bem|Rep: Squalene-hopene
cyclase -, partial (2%)
Length = 741
Score = 99.6 bits (50), Expect = 1e-20
Identities = 93/107 (86%), Gaps = 4/107 (3%)
Strand = Plus / Plus
Query: 305 tcgcttctctgcttcattcaattgcatcatcgtcgacgcttgccttctcttccgtgttca 364
|||| |||||||||| |||||||||||||||| ||||||| ||| |||||||||||
Sbjct: 115 tcgcgtctctgcttccttcaattgcatcatcgccgacgctcgcc----gttccgtgttca 170
Query: 365 aggaggtttcgctcgccggaaatgggggaaccagccatatttcgaca 411
||||| ||||||||||| ||||||| ||||||| ||| |||||||||
Sbjct: 171 aggagatttcgctcgccagaaatggaggaaccaaccagatttcgaca 217
>gnl|LJGI|AV777990 similar to UniRef100_Q4RFJ5 Cluster: Chromosome 8 SCAF15119 whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep:, partial (1%)
Length = 247
Score = 99.6 bits (50), Expect = 1e-20
Identities = 93/107 (86%), Gaps = 4/107 (3%)
Strand = Plus / Plus
Query: 305 tcgcttctctgcttcattcaattgcatcatcgtcgacgcttgccttctcttccgtgttca 364
|||| |||||||||| |||||||||||||||| ||||||| ||| |||||||||||
Sbjct: 12 tcgcgtctctgcttccttcaattgcatcatcgccgacgctcgcc----gttccgtgttca 67
Query: 365 aggaggtttcgctcgccggaaatgggggaaccagccatatttcgaca 411
||||| ||||||||||| ||||||| ||||||| ||| |||||||||
Sbjct: 68 aggagatttcgctcgccagaaatggaggaaccaaccagatttcgaca 114
>gnl|LJGI|TC61586
Length = 794
Score = 97.6 bits (49), Expect = 5e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 354 ttccgtgttcaaggaggtttcgctcgccggaaatgggggaaccagccatatttcgacagc 413
||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 196 ttccgtgctcaaggagatttcgctcgccggaaatggaggaaccagccatatttcgacagc 255
Query: 414 t 414
|
Sbjct: 256 t 256
>gnl|LJGI|GO016292 similar to UniRef100_Q6BXW0 Cluster: Debaryomyces hansenii
chromosome A of strain CBS767 of Debaryomyces hansenii;
n=1; Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii),
partial (11%)
Length = 810
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 273 tacaactcagtttctcatctgctcccgtcaaatcgcttctctgcttcattcaattgcatc 332
||||| ||||||||||||||| ||| ||||||||| |||||||||| ||||||| ||||
Sbjct: 704 tacaagtcagtttctcatctgttcctgtcaaatcgggtctctgcttccttcaatttcatc 645
Query: 333 atcgtcgacgcttgccttctcttccgtgttcaaggaggtttcgctcgccg 382
||| | ||| || ||| |||||||||||||||||||||| |||||||
Sbjct: 644 atcacgcatgctcgctttcccttccgtgttcaaggaggtttccctcgccg 595
>gnl|LJGI|CB826921 similar to UniRef100_UPI00006A06AA Cluster: Leucine-rich repeats
and immunoglobulin-like domains protein 1 precursor
(LIG-1).; n=1;, partial (1%)
Length = 620
Score = 91.7 bits (46), Expect = 3e-18
Identities = 92/107 (85%), Gaps = 4/107 (3%)
Strand = Plus / Plus
Query: 305 tcgcttctctgcttcattcaattgcatcatcgtcgacgcttgccttctcttccgtgttca 364
|||| |||||||||| |||||||||||||||| ||||||| | | | ||||||||||
Sbjct: 72 tcgcgtctctgcttccttcaattgcatcatcgccgacgctcggcgt----tccgtgttca 127
Query: 365 aggaggtttcgctcgccggaaatgggggaaccagccatatttcgaca 411
||||| ||||||||||| ||||||| ||||||| ||| |||||||||
Sbjct: 128 aggagatttcgctcgccagaaatggaggaaccaaccagatttcgaca 174
>gnl|LJGI|TC66565 similar to UniRef100_Q6BXW0 Cluster: Debaryomyces hansenii
chromosome A of strain CBS767 of Debaryomyces hansenii;
n=1; Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii),
partial (11%)
Length = 807
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 273 tacaactcagtttctcatctgctcccgtcaaatcgcttctctgcttcattcaattgcatc 332
||||| ||||||||||||||| ||| ||||||||| |||||||||| ||||||| ||||
Sbjct: 391 tacaagtcagtttctcatctgttcctgtcaaatcgggtctctgcttccttcaatttcatc 450
Query: 333 atcgtcgacgcttgccttctcttccgtgttcaaggaggtttcgctcgccg 382
||| | ||| || ||| |||||||||||||||||||||| |||||||
Sbjct: 451 atcacgcatgctcgctttcccttccgtgttcaaggaggtttccctcgccg 500
>gnl|LJGI|TC65808 similar to UniRef100_Q92E97 Cluster: Lin0563 protein; n=1; Listeria
innocua|Rep: Lin0563 protein - Listeria innocua, partial
(5%)
Length = 655
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 358 gtgttcaaggaggtttcgctcgccggaaatgggggaaccagccatatttcgaca 411
|||||||||||| |||| ||||| |||||||| ||||||| ||| |||||||||
Sbjct: 131 gtgttcaaggagatttcactcgctggaaatggaggaaccaaccagatttcgaca 184