Miyakogusa Predicted Gene
- Lj0g3v0248479.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0248479.1 Non Chatacterized Hit- tr|C6TAN4|C6TAN4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32414
PE,96.57,0,ELONGATNFCT,Elongation factor, GTP-binding domain; no
description,NULL; P-loop containing nucleoside,CUFF.16281.1
(1401 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57716 similar to UniRef100_A7QBK2 Cluster: Chromosome... 1794 0.0
gnl|LJGI|TC58066 homologue to UniRef100_A7QBK2 Cluster: Chromoso... 1304 0.0
gnl|LJGI|FS356018 homologue to UniRef100_A7QBK2 Cluster: Chromos... 1231 0.0
gnl|LJGI|TC64779 similar to UniRef100_A7QBK2 Cluster: Chromosome... 854 0.0
gnl|LJGI|FS337431 homologue to UniRef100_A7QBK2 Cluster: Chromos... 404 e-112
gnl|LJGI|BP083808 100 5e-20
gnl|LJGI|BP051192 70 4e-11
>gnl|LJGI|TC57716 similar to UniRef100_A7QBK2 Cluster: Chromosome chr13 scaffold_74,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_74, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1968
Score = 1794 bits (905), Expect = 0.0
Identities = 1265/1385 (91%)
Strand = Plus / Plus
Query: 1 atgtcgcggaagggtttgatggaacaggacctcagcaagctggatgtggctaagttgcat 60
||||| |||||||||||||||||||| ||||| || ||| |||||||| | || ||||||
Sbjct: 209 atgtcacggaagggtttgatggaacaagacctgagtaagttggatgtgtcaaaattgcat 268
Query: 61 ccactttctcctgaagtcatttctcgccaagctactattaacattggcaccataggccat 120
|||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 269 ccactttcgcctgaagtcatatctcggcaagctactattaatattggcaccataggccat 328
Query: 121 gtggctcatggaaagtcaacagttgtgaaagcaatatcaggcgttcagactgtgcgtttt 180
||||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 329 gtggcccatggaaagtcaaccgttgtgaaagcaatatcaggtgttcagaccgtgcgtttt 388
Query: 181 aagaatgagttggaacgtaacattacaatcaagcttggctatgcgaatgccaaaatatat 240
|| | |||||||||||| ||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 389 aaaagtgagttggaacgcaacattacaataaagcttggctatgcaaatgcaaaaatatat 448
Query: 241 aaatgtgaagatgaacggtgtccaaggcctatgagctacaaggcttatggaagtggaaag 300
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 449 aaatgtgaagatgcacggtgtccgaggcctatgagctacaaggcttatggaagtgggaag 508
Query: 301 gaagatagtcctatgtgtgatgtaccagggtttgagaactccaagatgaaattgttgaga 360
|||||| |||||||||||| |||||||||||||| |||| || ||||||||||||||||
Sbjct: 509 gaagatgctcctatgtgtgaagtaccagggtttgaaaactgcaggatgaaattgttgaga 568
Query: 361 catgtttcttttgttgattgcccgggacatgatattctcatggctacaatgcttaatgga 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 catgtttcttttgtcgattgcccgggacatgatattctcatggctacaatgcttaatgga 628
Query: 421 gcagcaatcatggacggagctttgctactcattgctgctaatgaaagctgccctcaacca 480
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 629 gcagcaatcatggatggagctctgctactcattgctgctaatgaaagctgccctcaacct 688
Query: 481 caaacttctgagcatttagctgctgtggaaattatgcgtctacagcacattataatcctt 540
||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 689 caaacttctgagcatttagctgcggttgaaattatgcgtctgcagcacattataatcctt 748
Query: 541 cagaacaaggtagacctgattcaagaaaatgtggcaatcaatcagcatgaggcgattcag 600
||||||||||||||||| || | |||||| |||||||||||||||||||| | ||||||
Sbjct: 749 cagaacaaggtagacctaatcccagaaaacgtggcaatcaatcagcatgaagatattcag 808
Query: 601 aagtttatacaaggaactgttgctggtggtgcaccagtggtacctatttcagcacagttg 660
||||| || |||||||||||||| | ||||| |||||||||||||||||||| |||
Sbjct: 809 aagttcattgcaggaactgttgctgttacggcacctgtggtacctatttcagcacaattg 868
Query: 661 aagtataatattgatgtcgtgtgtgaatatattgtgaaaaagatcccaatccctgaaagg 720
|||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 869 aagtataacattgatgttgtgtgtgaatatattgtgaaaaagatcccaatccccgaaagg 928
Query: 721 aacttcatttctccaccaaatatgatagtaattcgatcatttgacgtcaataaacccggt 780
||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||
Sbjct: 929 aacttcatttctccaccaaatatgatattaattcgatcatttgatgtcaataaacctggt 988
Query: 781 tatgaggttgatgaaataaaaggaggcgtagctggtggaagcattctgaggggtgttttg 840
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 989 tatgaggttgatgaaataaaaggaggtgtagctggtggaagcattctgaggggtgtttta 1048
Query: 841 aagttcaaccaattcattgaagttcgacctgggataattgttaaagacgacagtggaaac 900
||| ||||||||||||||||||||||||||||| |||||| |||||| | | |||||||
Sbjct: 1049 aaggtcaaccaattcattgaagttcgacctgggttaattggtaaagatgtgaatggaaac 1108
Query: 901 attcgatgcacacccatatactcgagaatagtttcattgtatgctgaacaaaatgagctt 960
|||| |||||||||||||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 1109 attcaatgcacacccatatactccaggatagtttcattgtacgctgaacaaaatgagctt 1168
Query: 961 caatttgctgtgccgggaggccttattggtgtcgggacaacgatggatcccactttgaca 1020
|||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 1169 caatttgctgtgcctggaggccttattggtgttgggaccacgatggatcctactttgacg 1228
Query: 1021 cgtgctgacaggttggtagggcaagttcttggagaggttggatcactgcctgaggttttt 1080
|||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1229 cgtggtgaccagttggtagggcatattcttggagaggttggatcactgcctgaggttttt 1288
Query: 1081 gttgaacttgaggtaaactttttcttgctccggaggcttcttggtgtccggacaaaaggc 1140
|||||||||||||| |||||||||||||| ||| |||||||||||||||| |||||||||
Sbjct: 1289 gttgaacttgaggttaactttttcttgcttcggcggcttcttggtgtccgaacaaaaggc 1348
Query: 1141 tctgagagacagggtaaggtaactaagctgactaaaacagagatgcttatgttgaacata 1200
|| |||||||||| |||||| |||||||||| ||| |||| ||| ||||||||||
Sbjct: 1349 tcagagagacaggaaaaggtagctaagctgaccaaaggagagccgctactgttgaacatt 1408
Query: 1201 gggtcaatgtcaacaggtgcaagagtaattgctgtgaagaatgacctggcgaaattgcaa 1260
|| ||||||||| |||||| | |||||||||||||||||||||||| || |||||||||
Sbjct: 1409 ggatcaatgtcagcaggtggcaaagtaattgctgtgaagaatgaccttgctaaattgcaa 1468
Query: 1261 cttacttcccccgtgtgcactagcaagggtgagaagattgcactcagtcgacgtgtcgag 1320
|| ||| |||| ||||| |||||||||||||||||||| ||||| |||||||||||| ||
Sbjct: 1469 ctcactacccctgtgtgtactagcaagggtgagaagatcgcacttagtcgacgtgtcaag 1528
Query: 1321 aagcattggcgccttatcgggtggggtcaaatccaagctggactcacccttgatgtccct 1380
|||| |||||| |||||||||||||||||||| ||||| ||| |||| ||||||||||||
Sbjct: 1529 aagctttggcgtcttatcgggtggggtcaaattcaagccggaatcactcttgatgtccct 1588
Query: 1381 cctgc 1385
|||||
Sbjct: 1589 cctgc 1593
>gnl|LJGI|TC58066 homologue to UniRef100_A7QBK2 Cluster: Chromosome chr13
scaffold_74, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_74, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (47%)
Length = 793
Score = 1304 bits (658), Expect = 0.0
Identities = 658/658 (100%)
Strand = Plus / Plus
Query: 1 atgtcgcggaagggtttgatggaacaggacctcagcaagctggatgtggctaagttgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atgtcgcggaagggtttgatggaacaggacctcagcaagctggatgtggctaagttgcat 195
Query: 61 ccactttctcctgaagtcatttctcgccaagctactattaacattggcaccataggccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ccactttctcctgaagtcatttctcgccaagctactattaacattggcaccataggccat 255
Query: 121 gtggctcatggaaagtcaacagttgtgaaagcaatatcaggcgttcagactgtgcgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gtggctcatggaaagtcaacagttgtgaaagcaatatcaggcgttcagactgtgcgtttt 315
Query: 181 aagaatgagttggaacgtaacattacaatcaagcttggctatgcgaatgccaaaatatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aagaatgagttggaacgtaacattacaatcaagcttggctatgcgaatgccaaaatatat 375
Query: 241 aaatgtgaagatgaacggtgtccaaggcctatgagctacaaggcttatggaagtggaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aaatgtgaagatgaacggtgtccaaggcctatgagctacaaggcttatggaagtggaaag 435
Query: 301 gaagatagtcctatgtgtgatgtaccagggtttgagaactccaagatgaaattgttgaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gaagatagtcctatgtgtgatgtaccagggtttgagaactccaagatgaaattgttgaga 495
Query: 361 catgtttcttttgttgattgcccgggacatgatattctcatggctacaatgcttaatgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 catgtttcttttgttgattgcccgggacatgatattctcatggctacaatgcttaatgga 555
Query: 421 gcagcaatcatggacggagctttgctactcattgctgctaatgaaagctgccctcaacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gcagcaatcatggacggagctttgctactcattgctgctaatgaaagctgccctcaacca 615
Query: 481 caaacttctgagcatttagctgctgtggaaattatgcgtctacagcacattataatcctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 caaacttctgagcatttagctgctgtggaaattatgcgtctacagcacattataatcctt 675
Query: 541 cagaacaaggtagacctgattcaagaaaatgtggcaatcaatcagcatgaggcgattcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 cagaacaaggtagacctgattcaagaaaatgtggcaatcaatcagcatgaggcgattcag 735
Query: 601 aagtttatacaaggaactgttgctggtggtgcaccagtggtacctatttcagcacagt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 aagtttatacaaggaactgttgctggtggtgcaccagtggtacctatttcagcacagt 793
>gnl|LJGI|FS356018 homologue to UniRef100_A7QBK2 Cluster: Chromosome chr13 scaffold_74,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_74, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 802
Score = 1231 bits (621), Expect = 0.0
Identities = 621/621 (100%)
Strand = Plus / Minus
Query: 384 gggacatgatattctcatggctacaatgcttaatggagcagcaatcatggacggagcttt 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gggacatgatattctcatggctacaatgcttaatggagcagcaatcatggacggagcttt 562
Query: 444 gctactcattgctgctaatgaaagctgccctcaaccacaaacttctgagcatttagctgc 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctactcattgctgctaatgaaagctgccctcaaccacaaacttctgagcatttagctgc 502
Query: 504 tgtggaaattatgcgtctacagcacattataatccttcagaacaaggtagacctgattca 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtggaaattatgcgtctacagcacattataatccttcagaacaaggtagacctgattca 442
Query: 564 agaaaatgtggcaatcaatcagcatgaggcgattcagaagtttatacaaggaactgttgc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaaatgtggcaatcaatcagcatgaggcgattcagaagtttatacaaggaactgttgc 382
Query: 624 tggtggtgcaccagtggtacctatttcagcacagttgaagtataatattgatgtcgtgtg 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtggtgcaccagtggtacctatttcagcacagttgaagtataatattgatgtcgtgtg 322
Query: 684 tgaatatattgtgaaaaagatcccaatccctgaaaggaacttcatttctccaccaaatat 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaatatattgtgaaaaagatcccaatccctgaaaggaacttcatttctccaccaaatat 262
Query: 744 gatagtaattcgatcatttgacgtcaataaacccggttatgaggttgatgaaataaaagg 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatagtaattcgatcatttgacgtcaataaacccggttatgaggttgatgaaataaaagg 202
Query: 804 aggcgtagctggtggaagcattctgaggggtgttttgaagttcaaccaattcattgaagt 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggcgtagctggtggaagcattctgaggggtgttttgaagttcaaccaattcattgaagt 142
Query: 864 tcgacctgggataattgttaaagacgacagtggaaacattcgatgcacacccatatactc 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tcgacctgggataattgttaaagacgacagtggaaacattcgatgcacacccatatactc 82
Query: 924 gagaatagtttcattgtatgctgaacaaaatgagcttcaatttgctgtgccgggaggcct 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gagaatagtttcattgtatgctgaacaaaatgagcttcaatttgctgtgccgggaggcct 22
Query: 984 tattggtgtcgggacaacgat 1004
|||||||||||||||||||||
Sbjct: 21 tattggtgtcgggacaacgat 1
>gnl|LJGI|TC64779 similar to UniRef100_A7QBK2 Cluster: Chromosome chr13 scaffold_74,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_74, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 707
Score = 854 bits (431), Expect = 0.0
Identities = 437/439 (99%)
Strand = Plus / Plus
Query: 963 atttgctgtgccgggaggccttattggtgtcgggacaacgatggatcccactttgacacg 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2 atttgctgtgccgggaggccttattggtgtcgggacaacgatggatcccactttgacgcg 61
Query: 1023 tgctgacaggttggtagggcaagttcttggagaggttggatcactgcctgaggtttttgt 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgctgacaggttggtagggcaagttcttggagaggttggatcactgcctgaggtttttgt 121
Query: 1083 tgaacttgaggtaaactttttcttgctccggaggcttcttggtgtccggacaaaaggctc 1142
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 122 tgaacttgaggtaaactttttcttgctccgggggcttcttggtgtccggacaaaaggctc 181
Query: 1143 tgagagacagggtaaggtaactaagctgactaaaacagagatgcttatgttgaacatagg 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgagagacagggtaaggtaactaagctgactaaaacagagatgcttatgttgaacatagg 241
Query: 1203 gtcaatgtcaacaggtgcaagagtaattgctgtgaagaatgacctggcgaaattgcaact 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtcaatgtcaacaggtgcaagagtaattgctgtgaagaatgacctggcgaaattgcaact 301
Query: 1263 tacttcccccgtgtgcactagcaagggtgagaagattgcactcagtcgacgtgtcgagaa 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tacttcccccgtgtgcactagcaagggtgagaagattgcactcagtcgacgtgtcgagaa 361
Query: 1323 gcattggcgccttatcgggtggggtcaaatccaagctggactcacccttgatgtccctcc 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcattggcgccttatcgggtggggtcaaatccaagctggactcacccttgatgtccctcc 421
Query: 1383 tgctcctctactgaattga 1401
|||||||||||||||||||
Sbjct: 422 tgctcctctactgaattga 440
>gnl|LJGI|FS337431 homologue to UniRef100_A7QBK2 Cluster: Chromosome chr13
scaffold_74, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_74, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (27%)
Length = 785
Score = 404 bits (204), Expect = e-112
Identities = 261/280 (93%)
Strand = Plus / Plus
Query: 1 atgtcgcggaagggtttgatggaacaggacctcagcaagctggatgtggctaagttgcat 60
||||| |||||||||||||||||||| ||||| || ||| |||||||| | || ||||||
Sbjct: 217 atgtcacggaagggtttgatggaacaagacctgagtaagttggatgtgacaaaattgcat 276
Query: 61 ccactttctcctgaagtcatttctcgccaagctactattaacattggcaccataggccat 120
|||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 277 ccactttctcctgaagtcatatctcggcaagctactattaatattggcaccataggccat 336
Query: 121 gtggctcatggaaagtcaacagttgtgaaagcaatatcaggcgttcagactgtgcgtttt 180
||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 337 gtggcccatggaaagtcaacagttgtgaaagcaatatcaggtgttcagaccgtgcgtttt 396
Query: 181 aagaatgagttggaacgtaacattacaatcaagcttggctatgcgaatgccaaaatatat 240
|| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 397 aaaaatgagttggaacgtaacattacaatcaagcttggctatgcaaatgcaaaaatatat 456
Query: 241 aaatgtgaagatgaacggtgtccaaggcctatgagctaca 280
||||||||||||||||||||| | ||||||||||||||||
Sbjct: 457 aaatgtgaagatgaacggtgttcgaggcctatgagctaca 496
Score = 147 bits (74), Expect = 2e-34
Identities = 95/102 (93%)
Strand = Plus / Plus
Query: 282 ggcttatggaagtggaaaggaagatagtcctatgtgtgatgtaccagggtttgagaactc 341
||||||||||||||| ||||||||| |||||||||||| |||||||||||||| ||||
Sbjct: 584 ggcttatggaagtgggaaggaagatgctcctatgtgtgaagtaccagggtttgaaaactg 643
Query: 342 caagatgaaattgttgagacatgtttcttttgttgattgccc 383
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 644 caagatgaaattgttgagacatgtttcttttgtggattgccc 685
>gnl|LJGI|BP083808
Length = 366
Score = 99.6 bits (50), Expect = 5e-20
Identities = 123/146 (84%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 12 gggtttgatggaacaggacctcagcaagctggatgtggctaagttgcatccactttctcc 71
||||||||| ||||| ||||| | ||| ||||| || | || ||| |||||| |||||
Sbjct: 311 gggtttgattgaacaagacctaggtaagttggatatgacaaaattgtatccaccatctcc 252
Query: 72 tgaagtcatttctcgccaagctactattaacattggc-accataggccatgtggctcatg 130
|||||||| |||| |||||||||||||| || ||| |||||||||||| |||| ||||
Sbjct: 251 tgaagtcacatctcagcaagctactattaatatcggccaccataggccatttggcacatg 192
Query: 131 gaaagtcaacagttgtgaaagcaata 156
| ||||||||||||||||||||||||
Sbjct: 191 ggaagtcaacagttgtgaaagcaata 166
>gnl|LJGI|BP051192
Length = 516
Score = 69.9 bits (35), Expect = 4e-11
Identities = 79/91 (86%), Gaps = 2/91 (2%)
Strand = Plus / Minus
Query: 67 tctcctgaagtcatttctcgccaagctactattaacattggc-accataggccatgtggc 125
||||||||||||| |||| |||||||||||||| || ||| ||||||||| || ||||
Sbjct: 293 tctcctgaagtcacatctcagcaagctactattaatatcggccaccataggc-atttggc 235
Query: 126 tcatggaaagtcaacagttgtgaaagcaata 156
||||| || |||||||||||||||||||||
Sbjct: 234 acatgggaaatcaacagttgtgaaagcaata 204