Miyakogusa Predicted Gene

Lj0g3v0247689.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0247689.1 Non Chatacterized Hit- tr|K3XKC9|K3XKC9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si002352,48.05,0.000000000004,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.16201.1
         (321 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57314 similar to UniRef100_A7PE31 Cluster: Chromosome...   636   0.0  

>gnl|LJGI|TC57314 similar to UniRef100_A7PE31 Cluster: Chromosome chr11 scaffold_13,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr11 scaffold_13, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (72%)
          Length = 1325

 Score =  636 bits (321), Expect = 0.0
 Identities = 321/321 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgggaaatggggaagtaattcagggtgacaaggtcacgggggagggcaacttgaaaaaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708  atgggaaatggggaagtaattcagggtgacaaggtcacgggggagggcaacttgaaaaaa 767

                                                                        
Query: 61   gaagggaaatccgaacctaacggtacaagtgctgtcaaaagtaaaatcaaatggaaaaag 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768  gaagggaaatccgaacctaacggtacaagtgctgtcaaaagtaaaatcaaatggaaaaag 827

                                                                        
Query: 121  tttatcaaatcagccttgaaatcccatcctgatggaactttgaagatgaagaaactgaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828  tttatcaaatcagccttgaaatcccatcctgatggaactttgaagatgaagaaactgaga 887

                                                                        
Query: 181  aaagctgtcttcaaagcactccaggagtctgggattgtagtcaatgaaactgaattgagt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888  aaagctgtcttcaaagcactccaggagtctgggattgtagtcaatgaaactgaattgagt 947

                                                                        
Query: 241  gagacacttgagcagaagatcaattccagctccagatttgcaattgagaacaagtatgtg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948  gagacacttgagcagaagatcaattccagctccagatttgcaattgagaacaagtatgtg 1007

                                 
Query: 301  cgattggtggccaaagattga 321
            |||||||||||||||||||||
Sbjct: 1008 cgattggtggccaaagattga 1028