Miyakogusa Predicted Gene

Lj0g3v0247429.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0247429.1 Non Chatacterized Hit- tr|K4C4X5|K4C4X5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,26.98,0.000000003,coiled-coil,NULL; seg,NULL,gene.g19270.t1.1
         (1884 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO026280                                                     329   4e-89

>gnl|LJGI|GO026280 
          Length = 610

 Score =  329 bits (166), Expect = 4e-89
 Identities = 235/258 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1048 gccaatggtttgcataaaaacctgcacactccaatttcaaaaaatgaagtcaatacacaa 1107
            ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||
Sbjct: 140  gccaatggtttgcataaaaacctgcccactccaatttcaaaaaatgatgtcaataaacaa 199

                                                                        
Query: 1108 aaacgaatcggacgtgaacaaaaggcagtagctacagttaatggtagtaaggcatggagt 1167
             |  |||     | ||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 200  tatggaactcatcatgatcaaaaggcagcagctacagttaatggtagtaaggcatggagt 259

                                                                        
Query: 1168 caaaagcctaaatctgaaattgacagggtggttttaaaaaccaaagcagagaaagaacca 1227
            | |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 260  cgaaagcctaaatctgaaattgacagggtggttttaaaaatcaaagtagagaaagaacca 319

                                                                        
Query: 1228 gaccttgttaagaaccatgtagttttgataggatctatatcagttaatcttggtaattgt 1287
             |||| |||||||| |||||||||||||||||| || |||||||||||||||||||||| 
Sbjct: 320  aacctagttaagaatcatgtagttttgataggacctgtatcagttaatcttggtaattgc 379

                              
Query: 1288 agaaaatcagagggtaat 1305
            ||||||||||||||||||
Sbjct: 380  agaaaatcagagggtaat 397