Miyakogusa Predicted Gene

Lj0g3v0247339.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0247339.1 Non Chatacterized Hit- tr|I1KJT4|I1KJT4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53330
PE,77.78,3e-19,seg,NULL; DUF1070,Arabinogalactan peptide,
AGP,NODE_28316_length_525_cov_213.746674.path1.1
         (192 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71666                                                      381   e-105
gnl|LJGI|BP051040                                                     145   1e-34

>gnl|LJGI|TC71666 
          Length = 505

 Score =  381 bits (192), Expect = e-105
 Identities = 192/192 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaggtgtttagagttcagctctttgtgatgtccatcttagctcttgctattgctttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53  atggaggtgtttagagttcagctctttgtgatgtccatcttagctcttgctattgctttt 112

                                                                       
Query: 61  gtgataccctcaatcaatgctcaggtccctgctcctgcccctgctcccacaagtgatggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gtgataccctcaatcaatgctcaggtccctgctcctgcccctgctcccacaagtgatggg 172

                                                                       
Query: 121 ataacagtggaccaaggagttgcctatgtgctaatgatgctagctctggcccttacttac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ataacagtggaccaaggagttgcctatgtgctaatgatgctagctctggcccttacttac 232

                       
Query: 181 atcattcattaa 192
           ||||||||||||
Sbjct: 233 atcattcattaa 244


>gnl|LJGI|BP051040 
          Length = 542

 Score =  145 bits (73), Expect = 1e-34
 Identities = 87/89 (97%), Gaps = 2/89 (2%)
 Strand = Plus / Plus

                                                                       
Query: 31  atgtccatcttagctcttgctattgcttttgtgataccctcaatcaatgctcaggtccct 90
           ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtccatcttagctct-gctat-gcttttgtgataccctcaatcaatgctcaggtccct 58

                                        
Query: 91  gctcctgcccctgctcccacaagtgatgg 119
           |||||||||||||||||||||||||||||
Sbjct: 59  gctcctgcccctgctcccacaagtgatgg 87