Miyakogusa Predicted Gene
- Lj0g3v0247239.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0247239.1 Non Chatacterized Hit- tr|G0QR33|G0QR33_ICHMG
Mitosis protein DIM1, putative OS=Ichthyophthirius mul,36.76,2e-19,no
description,Thioredoxin-like fold; DIM1,mRNA splicing factor,
thioredoxin-like U5 snRNP; Thioredo,CUFF.16158.1
(459 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72299 similar to UniRef100_A7QKT3 Cluster: Chromosome... 402 e-112
gnl|LJGI|BW622586 similar to UniRef100_A7QKT3 Cluster: Chromosom... 331 2e-90
gnl|LJGI|AW719343 UniRef100_A7QKT3 Cluster: Chromosome undetermi... 115 2e-25
>gnl|LJGI|TC72299 similar to UniRef100_A7QKT3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (47%)
Length = 477
Score = 402 bits (203), Expect = e-112
Identities = 212/215 (98%)
Strand = Plus / Plus
Query: 1 atgaattacatgttaacaacgttgtcgaagaagaaagaagtggattccatcatcagagac 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atgagttacatgttaacaacgttgtcgaagaagaaagaagtggattccatcatcagagac 322
Query: 61 accattgataaggtccttgtcctccgctttggtcgtgcctctgaccctgtctgtctccag 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 accatcgataaggtccttgtcctccgctttggtcgtgcctctgaccctgtctgtctccag 382
Query: 121 ctcgatcaaattttttctaaagcagcaagggatgtgtccaagtttgcaacagtggcactg 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctcgatcaaattctttctaaagcagcaagggatgtgtccaagtttgcaacagtggcactg 442
Query: 181 gttgatgttgattccccagacattcaagtctatgt 215
|||||||||||||||||||||||||||||||||||
Sbjct: 443 gttgatgttgattccccagacattcaagtctatgt 477
>gnl|LJGI|BW622586 similar to UniRef100_A7QKT3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (39%)
Length = 485
Score = 331 bits (167), Expect = 2e-90
Identities = 176/179 (98%)
Strand = Plus / Plus
Query: 1 atgaattacatgttaacaacgttgtcgaagaagaaagaagtggattccatcatcagagac 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atgagttacatgttaacaacgttgtcgaagaagaaagaagtggattccatcatcagagac 366
Query: 61 accattgataaggtccttgtcctccgctttggtcgtgcctctgaccctgtctgtctccag 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 accatcgataaggtccttgtcctccgctttggtcgtgcctctgaccctgtctgtctccag 426
Query: 121 ctcgatcaaattttttctaaagcagcaagggatgtgtccaagtttgcaacagtggcact 179
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctcgatcaaattctttctaaagcagcaagggatgtgtccaagtttgcaacagtggcact 485
>gnl|LJGI|AW719343 UniRef100_A7QKT3 Cluster: Chromosome undetermined scaffold_114,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_114, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 293
Score = 115 bits (58), Expect = 2e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 402 cccgctcccacctgaacgtataccaaaataccaattactgtaccagggtgtctaaaac 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccgctcccacctgaacgtataccaaaataccaattactgtaccagggtgtctaaaac 58