Miyakogusa Predicted Gene

Lj0g3v0247139.1
Show Alignment: 
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0247139.1 tr|H1WHI8|H1WHI8_9CYAN ATP-dependent Clp protease
adapter protein ClpS OS=Arthrospira sp. PCC 8005
G,57.5,3e-19,ClpS-like,Ribosomal protein L7/L12, C-terminal/adaptor
protein ClpS-like; seg,NULL; ClpS,Adaptor
pro,NODE_56140_length_803_cov_50.184307.path1.1
         (471 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60255                                                      934   0.0  
gnl|LJGI|TC75725                                                      109   2e-23

>gnl|LJGI|TC60255 
          Length = 776

 Score =  934 bits (471), Expect = 0.0
 Identities = 471/471 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagagtgccatttgtggcagaatgggtctctctcccaaccacgtcttcgcaccaggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  atgaagagtgccatttgtggcagaatgggtctctctcccaaccacgtcttcgcaccaggg 131

                                                                       
Query: 61  gacaaatattctttttgtgtgggaccatgttccaatgtttgcattcccatggctgcatta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gacaaatattctttttgtgtgggaccatgttccaatgtttgcattcccatggctgcatta 191

                                                                       
Query: 121 gcaacaggacctggtaaagggggaggtctgctggaaaagccagttattgagaaagtctcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gcaacaggacctggtaaagggggaggtctgctggaaaagccagttattgagaaagtctcc 251

                                                                       
Query: 181 cctggccgtgaatctgaatttgatttgaagaaatcgcggaaatcatcacctccatatcgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cctggccgtgaatctgaatttgatttgaagaaatcgcggaaatcatcacctccatatcgt 311

                                                                       
Query: 241 gtaatattacacaatgacaacttcaataaacgagaatatgttgttcaagtgctgatgaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gtaatattacacaatgacaacttcaataaacgagaatatgttgttcaagtgctgatgaag 371

                                                                       
Query: 301 gtcatccctggaatgactcttgataatgcagttaacatcatgcaagaagcacaccacaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gtcatccctggaatgactcttgataatgcagttaacatcatgcaagaagcacaccacaat 431

                                                                       
Query: 361 ggattgtcagtggtgattatctgtgcacaagctgatgctgaagatcattgcatgcaacta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggattgtcagtggtgattatctgtgcacaagctgatgctgaagatcattgcatgcaacta 491

                                                              
Query: 421 agaggcaatgggttactcagttcaattgaacctgcaggtggtggatgctga 471
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 agaggcaatgggttactcagttcaattgaacctgcaggtggtggatgctga 542


>gnl|LJGI|TC75725 
          Length = 658

 Score =  109 bits (55), Expect = 2e-23
 Identities = 175/215 (81%)
 Strand = Plus / Plus

                                                                       
Query: 250 cacaatgacaacttcaataaacgagaatatgttgttcaagtgctgatgaaggtcatccct 309
           ||||||||||||| ||| || || |||||||| |  ||||||||||||||||| || || 
Sbjct: 252 cacaatgacaactacaacaagcgtgaatatgtggggcaagtgctgatgaaggtgatacca 311

                                                                       
Query: 310 ggaatgactcttgataatgcagttaacatcatgcaagaagcacaccacaatggattgtca 369
           ||||||||  |||||||||| |||||||||||||| || ||||||   |||||| || ||
Sbjct: 312 ggaatgacagttgataatgcggttaacatcatgcaggaggcacacattaatggaatggca 371

                                                                       
Query: 370 gtggtgattatctgtgcacaagctgatgctgaagatcattgcatgcaactaagaggcaat 429
           || || || |||||||| ||||  ||||| ||||| || ||||||||  | ||||| |||
Sbjct: 372 gttgtcatcatctgtgctcaagtcgatgccgaagaccactgcatgcagttgagaggaaat 431

                                              
Query: 430 gggttactcagttcaattgaacctgcaggtggtgg 464
           ||  |  | ||||||||||| ||||||| ||||||
Sbjct: 432 ggccttttgagttcaattgagcctgcagatggtgg 466