Miyakogusa Predicted Gene
- Lj0g3v0246179.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0246179.1 Non Chatacterized Hit- tr|I1MCM5|I1MCM5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.81,0,COATOMER BETA
SUBUNIT,NULL; COATOMER,NULL; seg,NULL; coiled-coil,NULL;
Coatomer_WDAD,Coatomer, WD as,CUFF.16123.1
(897 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66692 similar to UniRef100_A7P7E9 Cluster: Chromosome... 743 0.0
gnl|LJGI|TC62201 similar to UniRef100_A7P7E9 Cluster: Chromosome... 287 6e-77
gnl|LJGI|GO025122 similar to UniRef100_Q9C827 Cluster: Coatomer ... 230 1e-59
gnl|LJGI|TC77037 similar to UniRef100_A7P7E9 Cluster: Chromosome... 208 4e-53
gnl|LJGI|BP056159 similar to UniRef100_A7P7E9 Cluster: Chromosom... 167 1e-40
gnl|LJGI|BP056998 similar to UniRef100_Q9C827 Cluster: Coatomer ... 167 1e-40
gnl|LJGI|BP065229 78 1e-13
>gnl|LJGI|TC66692 similar to UniRef100_A7P7E9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 1260
Score = 743 bits (375), Expect = 0.0
Identities = 598/671 (89%), Gaps = 1/671 (0%)
Strand = Plus / Plus
Query: 1 atgatagaagatgctcttgaagtagctactgacccggactatagatttgatctagcaata 60
|||||||| |||||||||||||||||||||||||| ||||| || || |||||||| ||
Sbjct: 37 atgatagaggatgctcttgaagtagctactgaccctgactacaggttcgatctagccatg 96
Query: 61 caacttggaagattagaggttgcaaagagcattgcaatagaagtgcagagtgagtcaaaa 120
|| ||||| | |||||| ||||||||| | ||||| | |||||||||||||||| | |||
Sbjct: 97 cagcttgggaaattagaagttgcaaagggtattgcgacagaagtgcagagtgagcctaaa 156
Query: 121 tggaagcagttgggagagctagctatgtctactggaaagttagaaatggctgaggaatgt 180
||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 157 tggaagcagttgggagaattagccatgtcttctggaaagttagaaatggctgaggaatgc 216
Query: 181 ttaaagcatgcaaaggatttgagtggattattactgctgtattcttctttaggcgatgct 240
||||| ||||||| |||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 217 ttaaaacatgcaatggatttgagtgggttgttgctgctatattcttctttaggagatgcc 276
Query: 241 gaaggaatatcaaatcttgcaacccttgctaaagagcaagggaagaacaatgtcgcattc 300
||||| ||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 277 gaagggttatcaaaacttgcaactcttgctaaagagcaagggaagaacaatgttgcattc 336
Query: 301 ctgtgcttatttatgttgggtaaacttgaagactgtcttcaactattggtagaaagcaat 360
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 337 ctttgcttatttatgttgggtaaacttgaagactgtcttcaactgttggtagaaagtaat 396
Query: 361 cggattccagaggcagctttaatggctagatcatatctcccaagtaaggtctctgagatt 420
|||||||| ||||| |||||||||||| |||| ||||||||||| || ||||| |||||
Sbjct: 397 cggattccggaggctgctttaatggctcgatcttatctcccaagcaa-gtctcagagata 455
Query: 421 gtggcaatttggaggaaagatctcaacaaggttaatcctaaagctgctgaatctttggct 480
|||||||||||||| ||||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 456 gtggcaatttggagaaaagatctcaacaaggttaatccaaaggctgctgaatcattggct 515
Query: 481 gatcctgaggaatatccaaatttgtttgaagactggcaagtcgcccttgctgttgaatct 540
||||||||||| ||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 516 gatcctgaggagtatcctaatttgttcgaagattggcaagttgctcttgctgttgaatct 575
Query: 541 aaagctatagaaacaaggaatgtttaccctcctgcagagcagtacatcagccatgctgac 600
||| || ||||||||||| ||||||||||||||| ||| |||| ||| ||||||||
Sbjct: 576 aaatctgtagaaacaaggggtgtttaccctcctgcggaggagtatgtcaaccatgctggt 635
Query: 601 aaatcacatgtaacccttgttgaagctttcagaaacatgcagattgaagaagaggagcct 660
||||||||||||||||| ||||||||||||||||||||||||||||||| || | |||
Sbjct: 636 aaatcacatgtaaccctagttgaagctttcagaaacatgcagattgaaggggaacaacct 695
Query: 661 cttgagaatgg 671
|||||||||||
Sbjct: 696 cttgagaatgg 706
Score = 69.9 bits (35), Expect = 3e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 782 gccaagaggaggccgttgtagtggatgcggaatcaacagatggtgcagtactcgtcaatg 841
|||||||||||| |||||||||||||| || || || |||||||| || ||| | ||||
Sbjct: 790 gccaagaggagggagttgtagtggatgctgattcgactgatggtgctgtcctcattaatg 849
Query: 842 gtaacgaggctgacgaaga 860
|||| ||||||||||||||
Sbjct: 850 gtaatgaggctgacgaaga 868
>gnl|LJGI|TC62201 similar to UniRef100_A7P7E9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 690
Score = 287 bits (145), Expect = 6e-77
Identities = 229/257 (89%)
Strand = Plus / Plus
Query: 415 gagattgtggcaatttggaggaaagatctcaacaaggttaatcctaaagctgctgaatct 474
||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 3 gagatagtggcaatttggagaaaagatctcaacaaggttaatccaaaggctgctgaatca 62
Query: 475 ttggctgatcctgaggaatatccaaatttgtttgaagactggcaagtcgcccttgctgtt 534
||||||||||||||||| ||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 63 ttggctgatcctgaggagtatcctaatttgttcgaagattggcaagttgctcttgctgtt 122
Query: 535 gaatctaaagctatagaaacaaggaatgtttaccctcctgcagagcagtacatcagccat 594
||||||||| || ||||||||||| ||||||||||||||| ||| |||| ||| ||||
Sbjct: 123 gaatctaaatctgtagaaacaaggggtgtttaccctcctgcggaggagtatgtcaaccat 182
Query: 595 gctgacaaatcacatgtaacccttgttgaagctttcagaaacatgcagattgaagaagag 654
|||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 183 gctggtaaatcacatgtaaccctagttgaagctttcagaaacatgcagattgaaggggaa 242
Query: 655 gagcctcttgagaatgg 671
| ||||||||||||||
Sbjct: 243 caacctcttgagaatgg 259
Score = 69.9 bits (35), Expect = 3e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 782 gccaagaggaggccgttgtagtggatgcggaatcaacagatggtgcagtactcgtcaatg 841
|||||||||||| |||||||||||||| || || || |||||||| || ||| | ||||
Sbjct: 343 gccaagaggagggagttgtagtggatgctgattcgactgatggtgctgtcctcattaatg 402
Query: 842 gtaacgaggctgacgaaga 860
|||| ||||||||||||||
Sbjct: 403 gtaatgaggctgacgaaga 421
>gnl|LJGI|GO025122 similar to UniRef100_Q9C827 Cluster: Coatomer subunit beta'-2; n=1;
Arabidopsis thaliana|Rep: Coatomer subunit beta'-2 -
Arabidopsis thaliana (Mouse-ear cress), partial (6%)
Length = 788
Score = 230 bits (116), Expect = 1e-59
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 782 gccaagaggaggccgttgtagtggatgcggaatcaacagatggtgcagtactcgtcaatg 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gccaagaggaggccgttgtagtggatgcggaatcaacagatggtgcagtactcgtcaatg 213
Query: 842 gtaacgaggctgacgaagagtggggtacgaataatgaaggagccccgtcagcctaa 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gtaacgaggctgacgaagagtggggtacgaataatgaaggagccccgtcagcctaa 269
Score = 157 bits (79), Expect = 1e-37
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 630 cagaaacatgcagattgaagaagaggagcctcttgagaatggtgactcgaattatgagca 689
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cagaaacatgcagattgaggaagaggagcctcttgagaatggtgactcgaattatgagca 61
Query: 690 aactaaccaagatgaagaggactacac 716
|||||| ||||||||||||||||||||
Sbjct: 62 aactaaacaagatgaagaggactacac 88
>gnl|LJGI|TC77037 similar to UniRef100_A7P7E9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 568
Score = 208 bits (105), Expect = 4e-53
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 793 gccgttgtagtggatgcggaatcaacagatggtgcagtactcgtcaatggtaacgaggct 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgttgtagtggatgcggaatcaacagatggtgcagtactcgtcaatggtaacgaggct 60
Query: 853 gacgaagagtggggtacgaataatgaaggagccccgtcagcctaa 897
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacgaagagtggggtacgaataatgaaggagccccgtcagcctaa 105
>gnl|LJGI|BP056159 similar to UniRef100_A7P7E9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 561
Score = 167 bits (84), Expect = 1e-40
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 782 gccaagaggaggccgttgtagtggatgcggaatcaacagatggtgcagtactcgtcaatg 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gccaagaggaggccgttgtagtggatgcggaatcaacagatggtgcagtactcgtcaatg 420
Query: 842 gtaacgaggctgacgaagagtggg 865
||||||||||||||||||||||||
Sbjct: 419 gtaacgaggctgacgaagagtggg 396
>gnl|LJGI|BP056998 similar to UniRef100_Q9C827 Cluster: Coatomer subunit beta'-2; n=1;
Arabidopsis thaliana|Rep: Coatomer subunit beta'-2 -
Arabidopsis thaliana (Mouse-ear cress), partial (4%)
Length = 506
Score = 167 bits (84), Expect = 1e-40
Identities = 105/112 (93%)
Strand = Plus / Minus
Query: 786 agaggaggccgttgtagtggatgcggaatcaacagatggtgcagtactcgtcaatggtaa 845
|||||||||| ||||||||||||||||||| || |||||| | ||||||||| |||||||
Sbjct: 420 agaggaggcccttgtagtggatgcggaatccaccgatggtcccgtactcgtccatggtaa 361
Query: 846 cgaggctgacgaagagtggggtacgaataatgaaggagccccgtcagcctaa 897
||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 360 cgaggctgacgaagagtggggtacgaataatgaaggagccccgtccgcctaa 309
>gnl|LJGI|BP065229
Length = 489
Score = 77.8 bits (39), Expect = 1e-13
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 787 gaggaggccgttgtagtggatgcggaatcaacagatggtgcagtactcgtc 837
||||||||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 471 gaggaggccgttgtagtggatgcggaatccaccgatggtgccgtactcgtc 421