Miyakogusa Predicted Gene
- Lj0g3v0246109.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0246109.1 Non Chatacterized Hit- tr|I1KVJ3|I1KVJ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56011
PE,36.59,2.7,seg,NULL,CUFF.16067.1
(247 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO022220 357 2e-98
gnl|LJGI|TC58545 295 6e-80
gnl|LJGI|TC75815 weakly similar to UniRef100_A9G6M8 Cluster: Two... 115 1e-25
>gnl|LJGI|GO022220
Length = 622
Score = 357 bits (180), Expect = 2e-98
Identities = 194/201 (96%)
Strand = Plus / Plus
Query: 1 atgatcttcagttttgtacttgaccagaaccaaatctgttgtacaccccaagccccttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 atgatcttcagttttgtacttgaccagaaccaaatctgttgtacaccccaagccccttcc 92
Query: 61 cattccacacagacagcacgcatcaagcaccactcctcaccaccacatcaacacccaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 cattccacacagacagcacgcatcaagcaccactcctcaccaccacatcaacacccaaag 152
Query: 121 nnnnnnngggggaaacattcaagagagaagaatatccgaaattgcaacccaaaatggcac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 aaaaaaagggggaaacattcaagagagaagaatatccgaaattgcaacccaaaatggcac 212
Query: 181 cacggatctgagcatcgagta 201
|||||||||||||||||||||
Sbjct: 213 cacggatctgagcatcgagta 233
>gnl|LJGI|TC58545
Length = 987
Score = 295 bits (149), Expect = 6e-80
Identities = 177/186 (95%), Gaps = 2/186 (1%)
Strand = Plus / Plus
Query: 18 acttgaccagaaccaaatctgttgtacaccccaagccccttcccattccacacagacagc 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 acttgaccagaaccaaatctgttgtacaccccaagccccttcccattccacacagacagc 62
Query: 78 acgcatcaag-caccactcctcaccaccacatcaacacccaaag-nnnnnnngggggaaa 135
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 63 acgcatcaagccaccactcctcaccaccacatcaacacccaaagaaaaaaaagggggaaa 122
Query: 136 cattcaagagagaagaatatccgaaattgcaacccaaaatggcaccacggatctgagcat 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 cattcaagagagaagaatatccgaaattgcaacccaaaatggcaccacggatctgagcat 182
Query: 196 cgagta 201
||||||
Sbjct: 183 cgagta 188
>gnl|LJGI|TC75815 weakly similar to UniRef100_A9G6M8 Cluster: Two-component response
regulator; n=1; Sorangium cellulosum 'So ce 56'|Rep:
Two-component response regulator - Sorangium cellulosum
(strain So ce56) (Polyangium cellulosum (strainSo
ce56)), partial (11%)
Length = 646
Score = 115 bits (58), Expect = 1e-25
Identities = 108/123 (87%), Gaps = 4/123 (3%)
Strand = Plus / Minus
Query: 46 ccccaagccccttcccattccacacagacagcacgcatcaag-caccactcctcaccacc 104
|||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| |||
Sbjct: 506 ccccaagccccttcccattccacagagacaacacgcatcaagccaccactcctca-cacg 448
Query: 105 acatcaacacccaaagnnnnnnngggggaaacattcaagagagaagaatatccgaaattg 164
| |||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 447 agatcaacacccaaagaaaaaa--ggggaaacattcaagagagaagaagatccgaaattg 390
Query: 165 caa 167
|||
Sbjct: 389 caa 387