Miyakogusa Predicted Gene

Lj0g3v0245139.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0245139.1 tr|G7JMY4|G7JMY4_MEDTR TIR-NBS-LRR RCT1-like
resistance protein OS=Medicago truncatula
GN=MTR_4g0150,53.68,2e-19,TIR,Toll/interleukin-1 receptor homology
(TIR) domain; DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR
CLASS,NODE_71989_length_270_cov_23.955555.path2.1
         (318 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS326053 weakly similar to UniRef100_A2Q6G5 Cluster: TI...   246   7e-65
gnl|LJGI|TC61438 weakly similar to UniRef100_A2Q6G5 Cluster: TIR...   167   5e-41

>gnl|LJGI|FS326053 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago
           truncatula|Rep: TIR - Medicago truncatula (Barrel
           medic), partial (31%)
          Length = 695

 Score =  246 bits (124), Expect = 7e-65
 Identities = 131/132 (99%), Gaps = 1/132 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgtcacagaaccataggccaggtggttctgccggtgttctacggtgtcgatccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atggactgtcacagaaccataggccaggtggttctgccggtgttctacggtgtcgatccc 623

                                                                       
Query: 61  tctgaagtgcggcgccaaactggtgaatttggaaacaaa-tttcaggatcttacaaacag 119
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 624 tctgaagtgcggcgccaaactggtgaatttggaaacaaattttcaggatcttacaaacag 683

                       
Query: 120 aattattgcact 131
           ||||||||||||
Sbjct: 684 aattattgcact 695


>gnl|LJGI|TC61438 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago
           truncatula|Rep: TIR - Medicago truncatula (Barrel
           medic), partial (33%)
          Length = 751

 Score =  167 bits (84), Expect = 5e-41
 Identities = 99/104 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgtcacagaaccataggccaggtggttctgccggtgttctacggtgtcgatccc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 630 atggactgtcacagaaccataggccaggtggttctgccggtgttctacggcgtcgatccc 689

                                                       
Query: 61  tctgaagtgcggcgccaaactggtgaatttggaaacaaatttca 104
           |||||||||||||||||||| ||||| ||||| || ||||||||
Sbjct: 690 tctgaagtgcggcgccaaaccggtgagtttgggaagaaatttca 733