Miyakogusa Predicted Gene

Lj0g3v0245039.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0245039.1 tr|Q9M6R6|Q9M6R6_VIGRR RNA helicase OS=Vigna
radiata var. radiata GN=VRH1 PE=2 SV=1,82.12,0,no description,NULL;
P-loop containing nucleoside triphosphate hydrolases,NULL;
DEAD_ATP_HELICASE,RN,CUFF.16049.1
         (1278 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82732 weakly similar to UniRef100_A7QGV9 Cluster: Chr...   214   1e-54

>gnl|LJGI|TC82732 weakly similar to UniRef100_A7QGV9 Cluster: Chromosome chr16
            scaffold_94, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr16 scaffold_94, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (13%)
          Length = 905

 Score =  214 bits (108), Expect = 1e-54
 Identities = 111/112 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1164 aactggtgctgtgtttgatgtaccagccaatgatttagatgcattccttgcgggtcagaa 1223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905  aactggtgctgtgtttgatgtaccagccaatgatttagatgcattccttgcgggtcagaa 846

                                                                
Query: 1224 gaatgctggtaatgtaagcctagaggaggtaaaactgttgccacgtttgcaa 1275
            |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 845  gaatgctggtaatgtaagcctagaggaggtaaaactattgccacgtttgcaa 794