Miyakogusa Predicted Gene

Lj0g3v0244709.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0244709.1 Non Chatacterized Hit- tr|I1JJ70|I1JJ70_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20540 PE,92.21,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAME,CUFF.15986.1
         (465 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69384 similar to UniRef100_A7PXH0 Cluster: Chromosome...    90   1e-17

>gnl|LJGI|TC69384 similar to UniRef100_A7PXH0 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (73%)
          Length = 1473

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 261/333 (78%)
 Strand = Plus / Plus

                                                                       
Query: 133 attttgatcatgtttgatctcactagtcgttgcacacttcacagtgttgttagatggtat 192
           |||||||| ||||||||||| || ||||| |||||| |  |||||||| |  ||||||| 
Sbjct: 628 attttgattatgtttgatctaacaagtcgatgcacattaaacagtgttctgggatggtac 687

                                                                       
Query: 193 agtgaagcaagaaagtggaatcagaatgcaattcccattctgataggaaccaagtttgat 252
           |  |||||||| || |||||||||| |||||||||  |  ||||||||||||| ||||||
Sbjct: 688 aaagaagcaaggaaatggaatcagactgcaattccagtgttgataggaaccaaatttgat 747

                                                                       
Query: 253 gattttgttaaattccccccagatttgcaatggaccattgtaacacaggcaagggcttat 312
           |||||  || |  ||||    ||| ||||||||||||| |  |   |||||||  | |||
Sbjct: 748 gatttcattcagctcccaattgatctgcaatggaccatcgccagtgaggcaagaacatat 807

                                                                       
Query: 313 gcaagagcaatgaaggcaacccttttcttttcaagtgcaacccacaatatcaatgtcaac 372
           ||||  ||  | || || || || |||||||| ||||||||  |||| |||||||| |||
Sbjct: 808 gcaaaggccctcaatgccactctattcttttccagtgcaacttacaacatcaatgtgaac 867

                                                                       
Query: 373 aaaattttcaagttcatcatggccaagctctttaacttgccatggacggtagaaagaaat 432
           || || |||||||||||||  || ||||||||| || |||||||||| || ||||| |||
Sbjct: 868 aagatcttcaagttcatcactgcgaagctctttgacctgccatggacagtggaaaggaat 927

                                            
Query: 433 ttgactttgggagaacccataattgacttctga 465
            | ||| | || || ||||| ||||| ||||||
Sbjct: 928 ctaactgttggggagcccatcattgatttctga 960