Miyakogusa Predicted Gene
- Lj0g3v0244519.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0244519.1 Non Chatacterized Hit- tr|I1ND38|I1ND38_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,30.81,5e-19,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; coiled-coil,NULL; SUBFAMILY NOT NAMED,,CUFF.15975.1
(693 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81578 weakly similar to UniRef100_Q9LVD3 Cluster: Sal... 1199 0.0
gnl|LJGI|TC64546 weakly similar to UniRef100_A7P9F5 Cluster: Chr... 163 2e-39
gnl|LJGI|FS330439 weakly similar to UniRef100_A7PSR1 Cluster: Ch... 96 3e-19
gnl|LJGI|FS338098 weakly similar to UniRef100_A7Q333 Cluster: Ch... 90 2e-17
gnl|LJGI|TC63385 weakly similar to UniRef100_Q8L7T0 Cluster: AT4... 88 9e-17
gnl|LJGI|BP042555 84 1e-15
gnl|LJGI|BW594341 weakly similar to UniRef100_A7QH77 Cluster: Ch... 80 2e-14
gnl|LJGI|TC81373 similar to UniRef100_A7PSR1 Cluster: Chromosome... 76 3e-13
gnl|LJGI|BW605216 similar to UniRef100_A7Q333 Cluster: Chromosom... 74 1e-12
gnl|LJGI|TC58745 64 1e-09
gnl|LJGI|FS341697 similar to UniRef100_A0H255 Cluster: Response ... 60 2e-08
gnl|LJGI|FS328368 weakly similar to UniRef100_Q9FIX3 Cluster: Gb... 54 1e-06
>gnl|LJGI|TC81578 weakly similar to UniRef100_Q9LVD3 Cluster: Salt-inducible
protein-like; n=2; Arabidopsis thaliana|Rep:
Salt-inducible protein-like - Arabidopsis thaliana
(Mouse-ear cress), partial (5%)
Length = 669
Score = 1199 bits (605), Expect = 0.0
Identities = 627/632 (99%), Gaps = 3/632 (0%)
Strand = Plus / Plus
Query: 38 cctttcgccagatcttccgaaatggcatgtcgccg--ccgagcgttaacatttacaactt 95
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 cctttcgccagatcttccgaaatggcatgtcgcccgcccgagcgttaacatttacaactt 60
Query: 96 cagg-atccgcggcttcgccggcgctggaaactttgaatcagaatcggcattgatagtgg 154
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagggatccgcggcttcgccggcgctggaaactttgaatcagaatcggcattgatagtgg 120
Query: 155 cgagatgcaaggagaagaaggtgcgggaagcgtttgggttgtggaaagccatgactgaca 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgagatgcaaggagaagaaggtgcgggaagcgtttgggttgtggaaagccatgactgaca 180
Query: 215 agggtgtggagccaaatttggtttcgtccaatgcggttattcaggggttgtgcgaagaag 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agggtgtggagccaaatttggtttcgtccaatgcggttattcaggggttgtgcgaagaag 240
Query: 275 aacggatagaagaggctgaggaggtggttgaggagatgaatcggaagggtttgacccctg 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacggatagaagaggctgaggaggtggttgaggagatgaatcggaagggtttgacccctg 300
Query: 335 atgagaacacttacatgtctctgtttcagctgctctgcgaccggtgcgaagcagataagg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgagaacacttacatgtctctgtttcagctgctctgcgaccggtgcgaagcagataagg 360
Query: 395 cttataaggttttgagtgaaatgattgttagaggtttgtcaccatctgtcgttatataca 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttataaggttttgagtgaaatgattgttagaggtttgtcaccatctgtcgttatataca 420
Query: 455 acaagcttgttagtgcatattgcgtcggggagagagagagggttgagaaggctgtgggga 514
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaagcttgttagtgcatgttgcgtcggggagagagagagggttgagaaggctgtgggga 480
Query: 515 ttttgagggtcatggctaagaggggtttgtcccctgatgctgttagttataccactgtta 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttttgagggtcatggctaagaggggtttgtcccctgatgctgttagttataccactgtta 540
Query: 575 tatccgggttttgttatcttgacgagccggagctgcagtggcggagcttgcaagggactg 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatccgggttttgttatcttgacgagccggagctgcagtggcggagcttgcaagggactg 600
Query: 635 ggagagggctcggccctcctattgttttgaaa 666
||||||||||||||||||||||||||||||||
Sbjct: 601 ggagagggctcggccctcctattgttttgaaa 632
>gnl|LJGI|TC64546 weakly similar to UniRef100_A7P9F5 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 877
Score = 163 bits (82), Expect = 2e-39
Identities = 282/346 (81%), Gaps = 2/346 (0%)
Strand = Plus / Plus
Query: 243 caatgcggttattcaggggttgtgcgaagaagaacggatagaagaggctgaggaggtggt 302
||||||| ||||||||||||||||| |||| | ||| |||||| ||| || || |
Sbjct: 314 caatgcgattattcaggggttgtgcagggaaggtagcataatagaggcagagaagatgct 373
Query: 303 tgaggagatgaatcggaagggtttgacccctgatgagaacacttacatgtctctgtttca 362
||||||||||||||||||||||||| |||||||||||| ||||||| |||||| ||||
Sbjct: 374 tgaggagatgaatcggaagggtttggcccctgatgagaggacttacacgtctctcattca 433
Query: 363 gctgctctgcgaccggtgcgaagca-gataaggcttataaggttttgagtgaaatgattg 421
|| |||||||| ||| | || | | ||||||| || ||||||||| ||||||||||
Sbjct: 434 tttgttctgcgacaagtg-gcagaacgttaaggctcatgaggttttgaatgaaatgattc 492
Query: 422 ttagaggtttgtcaccatctgtcgttatatacaacaagcttgttagtgcatattgcgtcg 481
|| | || || || || || | | || ||||||| | ||| || || ||||||| |
Sbjct: 493 ttcgtgggttttcgccctcgattgctacatacaacgaccttctttatgtatattgccgtg 552
Query: 482 gggagagagagagggttgagaaggctgtggggattttgagggtcatggctaagaggggtt 541
||| | || |||||||||| ||||||||||||||||||||| ||||||| |||||||||
Sbjct: 553 gggggggaacgagggttgaggaggctgtggggattttgaggggcatggctgagaggggtt 612
Query: 542 tgtcccctgatgctgttagttataccactgttatatccgggttttg 587
|||||||||||| |||||||||||||||| ||||||| ||||||||
Sbjct: 613 tgtcccctgatgttgttagttataccactattatatctgggttttg 658
Score = 63.9 bits (32), Expect = 1e-09
Identities = 79/94 (84%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 53 tccgaaatggcatgtcgccgccgagcgttaacatttacaacttcaggatccgcggctt-- 110
||||||| ||| |||||||||||| ||| ||| ||||||| ||| ||||||||||||
Sbjct: 160 tccgaaacggcgtgtcgccgccgaacgtaaacgcttacaacgtcatgatccgcggcttcg 219
Query: 111 -cgccggcgctggaaactttgaatcagaatcggc 143
||||| ||||| ||||| ||||||||||||||
Sbjct: 220 ccgccgccgctgtgaacttagaatcagaatcggc 253
>gnl|LJGI|FS330439 weakly similar to UniRef100_A7PSR1 Cluster: Chromosome chr8
scaffold_29, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 742
Score = 95.6 bits (48), Expect = 3e-19
Identities = 84/96 (87%)
Strand = Plus / Plus
Query: 492 gagggttgagaaggctgtggggattttgagggtcatggctaagaggggtttgtcccctga 551
|||||||||| |||| ||||||||||||||| |||| || ||| |||||||||||||||
Sbjct: 647 gagggttgaggaggccctggggattttgaggggcatgcctgagatgggtttgtcccctga 706
Query: 552 tgctgttagttataccactgttatatccgggttttg 587
||||||||||||| | |||||||||||| |||||
Sbjct: 707 cgctgttagttatataattgttatatccggtttttg 742
Score = 77.8 bits (39), Expect = 8e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 491 agagggttgagaaggctgtggggattttgagggtcatggctaagaggggtttgtcccctg 550
||||||||||||||| ||| ||||||||||||| |||||| ||| |||||| |||||||
Sbjct: 211 agagggttgagaagggtgttgggattttgaggggtatggctgagaagggtttatcccctg 270
Query: 551 atgctgttagttata 565
|||| |||||||||
Sbjct: 271 atgcccttagttata 285
Score = 58.0 bits (29), Expect = 8e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 15 ttcatccaccgccaccctgaaaacctttcgcca 47
||||| |||||||||||||||||||||||||||
Sbjct: 68 ttcattcaccgccaccctgaaaacctttcgcca 100
>gnl|LJGI|FS338098 weakly similar to UniRef100_A7Q333 Cluster: Chromosome chr12
scaffold_47, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (3%)
Length = 792
Score = 89.7 bits (45), Expect = 2e-17
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 224 agccaaatttggtttcgtccaatgcggttattcaggggttgtgcgaagaagaacggatag 283
||||||||| |||||| | |||||| | ||||||| | || |||| |||| |||||
Sbjct: 186 agccaaattcggtttctttcaatgcagctattcagagattctgcgcggaagggaggataa 245
Query: 284 aagaggctgaggaggtggttgaggagatgaatcggaagggtttgacccctgatgagaaca 343
||||||||| |||||| || ||||||||||||||||||||||| |||||||||||| |
Sbjct: 246 cagaggctgaagaggtgcttcaggagatgaatcggaagggtttggcccctgatgagacta 305
Query: 344 cttacatgtctct 356
|||||| ||||||
Sbjct: 306 cttacacgtctct 318
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 299 tggttgaggagatgaatcggaagggtttgacccctgatgagaacacttacatgtctctg 357
|||||||||||||| |||||| ||||||| ||||| |||||| |||||||| |||||||
Sbjct: 573 tggttgaggagatgcatcggaggggtttggcccctcatgagaccacttacaagtctctg 631
Score = 63.9 bits (32), Expect = 1e-09
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 394 gcttataaggttttgagtgaaatgattgttagaggtttgtcaccatctgtcgttatatac 453
||||||||| |||||||| ||||||||| ||| || || ||||| || || | |||||||
Sbjct: 668 gcttataagcttttgagtcaaatgattgctagtggcttttcaccctcggttgctatatac 727
Query: 454 aacaagcttgttagtgcatattgc 477
||| | |||||| |||||||||||
Sbjct: 728 aaccaccttgttcgtgcatattgc 751
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 99 gatccgcggcttcgccggcgctggaaactt 128
||||||||||||||||||||||||||||||
Sbjct: 97 gatccgcggcttcgccggcgctggaaactt 126
>gnl|LJGI|TC63385 weakly similar to UniRef100_Q8L7T0 Cluster: AT4g28010/T13J8_120;
n=1; Arabidopsis thaliana|Rep: AT4g28010/T13J8_120 -
Arabidopsis thaliana (Mouse-ear cress), partial (6%)
Length = 1001
Score = 87.7 bits (44), Expect = 9e-17
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 221 tggagccaaatttggtttcgtccaatgcggttattcaggggttgtgcgaagaagaacgga 280
|||||||| |||||||||||| ||| | |||||| ||| ||||| || |||| |||
Sbjct: 152 tggagccatatttggtttcgttcaaaggcgttattaaggaattgtgtgagaaagagagga 211
Query: 281 tagaagaggctgaggaggtggttgaggagatgaatcggaagggtttgacccctgat 336
| ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 212 tggaagaggctaaggaggtggttagggagatgaatcggaagggtttggcccctgat 267
Score = 87.7 bits (44), Expect = 9e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 490 gagagggttgagaaggctgtggggattttgagggtcatggctaagaggggtttgtcccct 549
|||||||||||| ||||| |||||||||| || | ||||||| |||||||||||||||||
Sbjct: 517 gagagggttgagcaggctttggggatttttagtgccatggctgagaggggtttgtcccct 576
Query: 550 gatgctgttagttata 565
||| |||||||||||
Sbjct: 577 gatcttgttagttata 592
Score = 52.0 bits (26), Expect = 5e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 388 gataaggcttataaggttttgagtgaaatgattg 421
|||||||||||||||||||| | |||||||||||
Sbjct: 421 gataaggcttataaggttttcaatgaaatgattg 454
>gnl|LJGI|BP042555
Length = 497
Score = 83.8 bits (42), Expect = 1e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 503 aggctgtggggattttgagggtcatggctaagaggggtttgtcccctgatgctgttagtt 562
||||||||||||||||||||| |||||||||||||||| ||||||||||| || || ||
Sbjct: 330 aggctgtggggattttgagggatatggctaagaggggttngtcccctgatgttgatactt 389
Query: 563 ataccactgttatatccgggttttg 587
|| | || |||||| |||||||||
Sbjct: 390 attaccctcttatatgcgggttttg 414
>gnl|LJGI|BW594341 weakly similar to UniRef100_A7QH77 Cluster: Chromosome chr18
scaffold_96, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_96, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 458
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 509 tggggattttgagggtcatggctaagaggggtttgtcccctgatgctgttagttatacca 568
||||||||||||||| |||| || ||| ||| ||||||||||||| ||||||||||| |
Sbjct: 116 tggggattttgaggggcatgcctcagatgggattgtcccctgatggtgttagttataacg 175
Query: 569 ctgttatatccg 580
||||||||||||
Sbjct: 176 ctgttatatccg 187
>gnl|LJGI|TC81373 similar to UniRef100_A7PSR1 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 663
Score = 75.8 bits (38), Expect = 3e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 498 tgagaaggctgtggggattttgagggtcatggctaagaggggtttgtcccctgatgctgt 557
|||| ||||| ||||| ||||||||| |||| || ||| || |||||||||||||||||
Sbjct: 429 tgaggaggctctgggggttttgaggggcatgcctgagatcgggttgtcccctgatgctgt 488
Query: 558 tagttataccactgttatatccgggttttg 587
||||||| ||||||||||| ||||||||
Sbjct: 489 tagttattgcactgttatattagggttttg 518
>gnl|LJGI|BW605216 similar to UniRef100_A7Q333 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 482
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 284 aagaggctgaggaggtggttgaggagatgaatcggaagggtttgacccctgatgagaaca 343
|||||||||||| | || |||||||||||| ||||||||||||| | |||||||||| |
Sbjct: 266 aagaggctgaggcgatgcttgaggagatgagtcggaagggtttggctcctgatgagagga 325
Query: 344 cttacatgtctct 356
|||||| ||||||
Sbjct: 326 cttacacgtctct 338
>gnl|LJGI|TC58745
Length = 782
Score = 63.9 bits (32), Expect = 1e-09
Identities = 97/118 (82%), Gaps = 3/118 (2%)
Strand = Plus / Plus
Query: 14 tttcatccaccgccaccctgaaaacctttcgccagatcttccgaaatggcatgtcgccgc 73
|||||| |||||||||||| |||||||||||||| || ||||| | ||| |||||||||
Sbjct: 295 tttcattcaccgccaccctcaaaacctttcgccacatggtccgatacggcgtgtcgccgc 354
Query: 74 cgagcgttaacattt---acaacttcaggatccgcggcttcgccggcgctggaaactt 128
||| || ||| || ||||| ||| ||||||||||||| ||| |||||| |||||
Sbjct: 355 cgaaggtcaacggttacaacaacgtcatgatccgcggcttctccgccgctgggaactt 412
>gnl|LJGI|FS341697 similar to UniRef100_A0H255 Cluster: Response regulator receiver;
n=1; Chloroflexus aggregans DSM 9485|Rep: Response
regulator receiver - Chloroflexus aggregans DSM 9485,
partial (11%)
Length = 805
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 278 ggatagaagaggctgaggaggtggttgaggagatgaatcggaaggg 323
|||| ||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 64 ggatggaagaggctcagaaggtgcttgaggagatgaatcggaaggg 109
>gnl|LJGI|FS328368 weakly similar to UniRef100_Q9FIX3 Cluster: Gb|AAD30619.1; n=1;
Arabidopsis thaliana|Rep: Gb|AAD30619.1 - Arabidopsis
thaliana, partial (7%)
Length = 779
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 387 agataaggcttataaggttttgagtgaaatgattg 421
||||||||||||||||||||| | |||||||||||
Sbjct: 719 agataaggcttataaggttttcactgaaatgattg 753