Miyakogusa Predicted Gene

Lj0g3v0244399.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0244399.1 Non Chatacterized Hit- tr|F6HXW8|F6HXW8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.86,0.000000000002,DUF4220,Domain of unknown function DUF4220;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.15968.1
         (1085 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75229 similar to UniRef100_A7P6I5 Cluster: Chromosome...   107   1e-22

>gnl|LJGI|TC75229 similar to UniRef100_A7P6I5 Cluster: Chromosome chr9 scaffold_7,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr9 scaffold_7, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (6%)
          Length = 786

 Score =  107 bits (54), Expect = 1e-22
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                        
Query: 947  ttggccacaggtacatcaagggttttgaaaagaaaggagccaagtactgttgtcttgctc 1006
            |||||| ||| ||||| ||||| ||||||| ||||| |  |||||||| ||||||| |||
Sbjct: 138  ttggcctcagctacataaagggatttgaaaggaaagcatgcaagtactattgtctttctc 197

                                              
Query: 1007 cattgattaaaggtgtttggcagtcttatgagaa 1040
            ||||||||||||||||||||||||||||||||||
Sbjct: 198  cattgattaaaggtgtttggcagtcttatgagaa 231