Miyakogusa Predicted Gene

Lj0g3v0244319.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0244319.1 Non Chatacterized Hit- tr|C5Z4M6|C5Z4M6_SORBI
Putative uncharacterized protein Sb10g022060
OS=Sorghu,31.8,2e-18,PROTEIN_KINASE_DOM,Protein kinase, catalytic
domain; LRR,Leucine-rich repeat; PROTEIN_KINASE_ATP,Pro,CUFF.16039.1
         (1903 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64052 similar to UniRef100_A7PJ96 Cluster: Chromosome...   285   5e-76
gnl|LJGI|GO025804 homologue to UniRef100_A7QPR6 Cluster: Chromos...    82   1e-14

>gnl|LJGI|TC64052 similar to UniRef100_A7PJ96 Cluster: Chromosome chr12 scaffold_18,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_18, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (14%)
          Length = 740

 Score =  285 bits (144), Expect = 5e-76
 Identities = 144/144 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1685 atgtgaaatctagcaatatcttgctagatggagagtttggagcgaaagttgcagattttg 1744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    atgtgaaatctagcaatatcttgctagatggagagtttggagcgaaagttgcagattttg 60

                                                                        
Query: 1745 gagttgccaaaattgtcaggggagttaaccaaggggcagaatcaatgtctgtgatagctg 1804
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gagttgccaaaattgtcaggggagttaaccaaggggcagaatcaatgtctgtgatagctg 120

                                    
Query: 1805 gatcatatggttacattgcaccag 1828
            ||||||||||||||||||||||||
Sbjct: 121  gatcatatggttacattgcaccag 144


>gnl|LJGI|GO025804 homologue to UniRef100_A7QPR6 Cluster: Chromosome chr10 scaffold_138,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr10 scaffold_138, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (19%)
          Length = 550

 Score = 81.8 bits (41), Expect = 1e-14
 Identities = 131/161 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1588 ttgttggattggccaactagatataaaattgcttttgatgctgctgaggggctttcttat 1647
            ||||||||||||||||| ||||| || || ||| ||||||||||||| || || ||||||
Sbjct: 110  ttgttggattggccaacaagatacaatatagctgttgatgctgctgaaggcctctcttat 169

                                                                        
Query: 1648 ttacatcatgattgtgcaccccctattgttcacagggatgtgaaatctagcaatatcttg 1707
             | |||||||||||||  ||  | |||||||| || ||| | || |||| ||||||||||
Sbjct: 170  ctgcatcatgattgtgttccggcaattgttcatagagatataaagtctaacaatatcttg 229

                                                     
Query: 1708 ctagatggagagtttggagcgaaagttgcagattttggagt 1748
            || || || || ||||| || |  || ||||||||||||||
Sbjct: 230  ctggacggggactttggtgcaagggtagcagattttggagt 270