Miyakogusa Predicted Gene

Lj0g3v0244089.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0244089.1 Non Chatacterized Hit- tr|I3T222|I3T222_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,44.7,2e-17,coiled-coil,NULL; seg,NULL,CUFF.15942.1
         (400 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW594421                                                      76   2e-13
gnl|LJGI|TC63203 weakly similar to UniRef100_Q0DH21 Cluster: Os0...    74   7e-13

>gnl|LJGI|BW594421 
          Length = 467

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 89/106 (83%)
 Strand = Plus / Plus

                                                                       
Query: 206 ctactcctcctcctaatcaatgcggattttatggaggttttaccagtgccattcttgata 265
           ||||| |||||||||| |||  |  ||| ||||| | |||||||| | ||||||||||||
Sbjct: 271 ctactactcctcctaaccaacacaaattatatggggtttttaccactaccattcttgata 330

                                                         
Query: 266 taattgaagagactcagggacaagttacgaatgtggagctcgcgcg 311
           |||||||||||||||||||||  ||||| | ||| ||||| |||||
Sbjct: 331 taattgaagagactcagggacgtgttactagtgtagagcttgcgcg 376


>gnl|LJGI|TC63203 weakly similar to UniRef100_Q0DH21 Cluster: Os05g0496400 protein;
           n=1; Oryza sativa Japonica Group|Rep: Os05g0496400
           protein - Oryza sativa subsp. japonica (Rice), partial
           (10%)
          Length = 1306

 Score = 73.8 bits (37), Expect = 7e-13
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 255 cattcttgatataattgaagagactcagggacaagttacgaatgtggagctcgcgcggaa 314
           |||||||||||||||||||||||||||||||| |||||| | ||| || || || || ||
Sbjct: 920 cattcttgatataattgaagagactcagggacgagttacaagtgtagaccttgcacgaaa 979

                    
Query: 315 ggctatgga 323
           |||||||||
Sbjct: 980 ggctatgga 988