Miyakogusa Predicted Gene
- Lj0g3v0243669.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0243669.1 tr|C7C6E1|C7C6E1_SOYBN T-complex protein 1
subunit delta OS=Glycine max GN=cctd PE=3
SV=1,95.09,0,TCP1_1,Chaperonin TCP-1, conserved site;
TCP1_3,Chaperonin TCP-1, conserved site; GroEL equatorial
d,CUFF.15914.1
(1590 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78480 homologue to UniRef100_A7VJA5 Cluster: Group II... 2974 0.0
gnl|LJGI|TC74502 homologue to UniRef100_Q70EL6 Cluster: Cytosoli... 1122 0.0
gnl|LJGI|TC61624 homologue to UniRef100_A7VJA5 Cluster: Group II... 914 0.0
gnl|LJGI|BW596840 homologue to UniRef100_A5B989 Cluster: T-compl... 373 e-102
gnl|LJGI|TC73040 similar to UniRef100_Q9ZRX1 Cluster: T-complex ... 98 2e-19
>gnl|LJGI|TC78480 homologue to UniRef100_A7VJA5 Cluster: Group II-chaperonin
delta-subunit; n=1; Glycine max|Rep: Group II-chaperonin
delta-subunit - Glycine max (Soybean), partial (98%)
Length = 2024
Score = 2974 bits (1500), Expect = 0.0
Identities = 1563/1584 (98%)
Strand = Plus / Plus
Query: 7 gctcctcaccgatcctccaagacggagtcctatgtcgacaacaagcgcaaggaagacatc 66
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 106 gctcctcaccgatcctccaagacggaatcctatgtcgacaacaagcgcaaggaagacatc 165
Query: 67 cggcatgccaacatcctcgcggcgcgctccgtcgccaacgccgtccgcaccagtctcggt 126
|| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 166 cgtcatgccaacatcgtcgccgcgcgctccgtcgccaacgccgtccgcaccagtctcggt 225
Query: 127 cccaaaggcatggacaagatgatctccacctcctccgacgaggtcatcatcaccaacgac 186
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 226 cccaaaggcatggacaagatgatttccacctcctccgacgaggttatcatcaccaacgac 285
Query: 187 ggcgccaccatcctcaacaagatgcaggtcctccaacccgccgccaagatgctcgtcgag 246
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ggtgccaccatcctcaacaagatgcaggtcctccaacccgccgccaagatgctcgtcgag 345
Query: 247 ctttccaagtctcaggactccgcagccggtgacggaaccaccaccgtcgtcgttatcgct 306
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 346 ctttccaagtctcaggactccgcagccggcgacggaaccaccaccgtcgtcgttatcgct 405
Query: 307 ggcgcactcctcgagcagtgcctcctcctcctctcccgcggcatccaccccaccgtcatc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ggcgcactcctcgagcagtgcctcctcctcctctcccgcggcatccaccccaccgtcatc 465
Query: 367 tccgattcactctacaaggcctccatcaaagccgtcgacgtcctcactgccatggccgtc 426
||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 466 tccgattcactctacaaggcctctattaaggccgtcgacgtcctcactgccatggccgtc 525
Query: 427 cccgtcgagctcaccgatcgtgactccctcgtcaaatccgccagcacctccctcaacagc 486
|||||||||||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 526 cccgtcgagctcaccgatcgcgattcactcgtcaaatccgccagcacctccctcaacagc 585
Query: 487 aaggtcgtcagccagtactccacccttctcgctcctctcgctgtcgacgccgtcctcaca 546
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 586 aaggtcgtcagccagtactccacccttctcgctcccctcgctgtcgacgccgtcctcaca 645
Query: 547 gtcatcgatcccgcccagcctgaaatggtcgatctccgtgatgttaagatcgtgaagaag 606
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 646 gtcatcgatcccgcccagcctgaaatggtcgatctccgcgatgttaagatcgtgaagaag 705
Query: 607 ctcggcggcaccgtcgacgataccgagctcgtcaggggccttgtctttgacaagaaggtg 666
|| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 cttgggggcaccgtggacgataccgagctcgtcaggggccttgtctttgacaagaaggtg 765
Query: 667 agccatgccgctggtggacctactcgcatggagaatgctaaaattgccgtgatccagttc 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 agccatgccgctggtggacctactcgcatggagaatgctaaaattgccgtgatccagttc 825
Query: 727 cagatttcacctccgaaaaccgacatcgagcagagcattgtggtgagtgattactctcag 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 cagatttcacctccgaaaaccgacatcgagcagagcattgtggtgagtgattactctcag 885
Query: 787 atggataggattttgaaggaagagaggagttacattctgggcatgattaagaagattaag 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 atggataggattttgaaggaagagaggagttacattctgggcatgattaagaagattaag 945
Query: 847 gcaactggttgcaatgttttgttgattcagaagagcattttaagagatgctgtcactgat 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 gcaactggttgcaatgttttgttgattcagaagagcattttaagagatgctgtcactgat 1005
Query: 907 ttgtctctgcattatcttgctaaagctaagatattggtgatcaaagatgtggaaagggat 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 ttgtctctgcattatcttgctaaagctaagatattggtgatcaaagatgtggaaagggat 1065
Query: 967 gagattgagttcattaccaagacattgaactgtttgcccattgccaacattgagcatttc 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 gagattgagttcattaccaagacattgaactgtttgcccattgccaacattgagcatttc 1125
Query: 1027 cgcgccgagaagttgggctatgctgatcttgtggaggaggtttctcttggtgatggcaag 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1126 cgcgccgagaagttgggctatgctgatcttgtggaggaggtttctcttggtgatggcaag 1185
Query: 1087 attgtgaagatttctgggattaaggacatggggaggaccacaactgtgcttgtccgcgga 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1186 attgtgaagatttctgggattaaggacatggggaggaccacaactgtgcttgtccgcgga 1245
Query: 1147 tccaaccagcttgtgcttgatgaagcggagcggagtcttcatgatgctttgtgtgttgtt 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1246 tccaaccagcttgtgcttgatgaagcggagcggagtcttcatgatgctttgtgtgttgtt 1305
Query: 1207 aggtgcttggttgccaagaggtttctgatagccggtggtggcgccccagagatagagttg 1266
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1306 aggtgcttggttgccaagaggtttctgatagccggtggtggcgcccctgagatagagttg 1365
Query: 1267 tcgaggcagctgggtgcctgggcaaaggtgcttcatgggatggagggttactgtgtgcga 1326
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1366 tcgaggcagctgggtgcctgggcaaaggtgcttcatgggatggagggttactgtgttcga 1425
Query: 1327 gcatttgctgaggcacttgaagtcattccttatactctggctgagaatgctggtttgaac 1386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1426 gcatttgctgaggcacttgaagtcattccttatactctggctgagaatgctggtttgaac 1485
Query: 1387 cccattgcaattgttactgagctgaggaatcgtcatgcccagggtgagatcaatactgga 1446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1486 cccattgcaattgttactgagctgaggaatcgtcatgcccagggtgagatcaatactgga 1545
Query: 1447 atcaatgtgaggaagggtcagatcacaaacatcttggaggagaatgtggtgcagccgctg 1506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1546 atcaatgtgaggaagggtcagatcacaaacatcttggaggagaatgtggtgcagccgctg 1605
Query: 1507 ctagtaagcacgagtgctatcaccttggcaacagagtgcgtgcggatgattttgaagatt 1566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1606 ctagtaagcacgagtgctatcaccttggcaacagagtgcgtgcggatgattttgaagatt 1665
Query: 1567 gatgatattgtaactgtgaggtag 1590
||||||||||||||||||||||||
Sbjct: 1666 gatgatattgtaactgtgaggtag 1689
>gnl|LJGI|TC74502 homologue to UniRef100_Q70EL6 Cluster: Cytosolic chaperonin
delta-subunit; n=1; Glycine max|Rep: Cytosolic
chaperonin delta-subunit - Glycine max (Soybean),
partial (34%)
Length = 839
Score = 1122 bits (566), Expect = 0.0
Identities = 566/566 (100%)
Strand = Plus / Plus
Query: 1 atggcggctcctcaccgatcctccaagacggagtcctatgtcgacaacaagcgcaaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atggcggctcctcaccgatcctccaagacggagtcctatgtcgacaacaagcgcaaggaa 333
Query: 61 gacatccggcatgccaacatcctcgcggcgcgctccgtcgccaacgccgtccgcaccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gacatccggcatgccaacatcctcgcggcgcgctccgtcgccaacgccgtccgcaccagt 393
Query: 121 ctcggtcccaaaggcatggacaagatgatctccacctcctccgacgaggtcatcatcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctcggtcccaaaggcatggacaagatgatctccacctcctccgacgaggtcatcatcacc 453
Query: 181 aacgacggcgccaccatcctcaacaagatgcaggtcctccaacccgccgccaagatgctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aacgacggcgccaccatcctcaacaagatgcaggtcctccaacccgccgccaagatgctc 513
Query: 241 gtcgagctttccaagtctcaggactccgcagccggtgacggaaccaccaccgtcgtcgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gtcgagctttccaagtctcaggactccgcagccggtgacggaaccaccaccgtcgtcgtt 573
Query: 301 atcgctggcgcactcctcgagcagtgcctcctcctcctctcccgcggcatccaccccacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 atcgctggcgcactcctcgagcagtgcctcctcctcctctcccgcggcatccaccccacc 633
Query: 361 gtcatctccgattcactctacaaggcctccatcaaagccgtcgacgtcctcactgccatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gtcatctccgattcactctacaaggcctccatcaaagccgtcgacgtcctcactgccatg 693
Query: 421 gccgtccccgtcgagctcaccgatcgtgactccctcgtcaaatccgccagcacctccctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gccgtccccgtcgagctcaccgatcgtgactccctcgtcaaatccgccagcacctccctc 753
Query: 481 aacagcaaggtcgtcagccagtactccacccttctcgctcctctcgctgtcgacgccgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 aacagcaaggtcgtcagccagtactccacccttctcgctcctctcgctgtcgacgccgtc 813
Query: 541 ctcacagtcatcgatcccgcccagcc 566
||||||||||||||||||||||||||
Sbjct: 814 ctcacagtcatcgatcccgcccagcc 839
>gnl|LJGI|TC61624 homologue to UniRef100_A7VJA5 Cluster: Group II-chaperonin
delta-subunit; n=1; Glycine max|Rep: Group II-chaperonin
delta-subunit - Glycine max (Soybean), partial (31%)
Length = 844
Score = 914 bits (461), Expect = 0.0
Identities = 491/501 (98%)
Strand = Plus / Plus
Query: 1090 gtgaagatttctgggattaaggacatggggaggaccacaactgtgcttgtccgcggatcc 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaagatttctgggattaaggacatggggaggaccacaactgtgcttgtccgcggatcc 60
Query: 1150 aaccagcttgtgcttgatgaagcggagcggagtcttcatgatgctttgtgtgttgttagg 1209
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaccagcttgtgctagatgaagcggagcggagtcttcatgatgctttgtgtgttgttagg 120
Query: 1210 tgcttggttgccaagaggtttctgatagccggtggtggcgccccagagatagagttgtcg 1269
||||||||||||||||||||||| |||||||| |||||||| || ||||||||| ||||
Sbjct: 121 tgcttggttgccaagaggtttctcatagccggcggtggcgcacctgagatagagctgtcc 180
Query: 1270 aggcagctgggtgcctgggcaaaggtgcttcatgggatggagggttactgtgtgcgagca 1329
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 aggcaactgggtgcctgggcaaaggtgcttcatgggatggagggttactgtgttcgagca 240
Query: 1330 tttgctgaggcacttgaagtcattccttatactctggctgagaatgctggtttgaacccc 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttgctgaggcacttgaagtcattccttatactctggctgagaatgctggtttgaacccc 300
Query: 1390 attgcaattgttactgagctgaggaatcgtcatgcccagggtgagatcaatactggaatc 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attgcaattgttactgagctgaggaatcgtcatgcccagggtgagatcaatactggaatc 360
Query: 1450 aatgtgaggaagggtcagatcacaaacatcttggaggagaatgtggtgcagccgctgcta 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatgtgaggaagggtcagatcacaaacatcttggaggagaatgtggtgcagccgctgcta 420
Query: 1510 gtaagcacgagtgctatcaccttggcaacagagtgcgtgcggatgattttgaagattgat 1569
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 421 gtaagcacgagtgctatcaccttggccacagagtgcgtgcggatgattttgaagattgat 480
Query: 1570 gatattgtaactgtgaggtag 1590
|||||||||||||||||||||
Sbjct: 481 gatattgtaactgtgaggtag 501
>gnl|LJGI|BW596840 homologue to UniRef100_A5B989 Cluster: T-complex protein 1, delta
subunit; n=1; Vitis vinifera|Rep: T-complex protein 1,
delta subunit - Vitis vinifera (Grape), partial (30%)
Length = 470
Score = 373 bits (188), Expect = e-102
Identities = 203/208 (97%)
Strand = Plus / Plus
Query: 496 agccagtactccacccttctcgctcctctcgctgtcgacgccgtcctcacagtcatcgat 555
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 171 agccagtactccacccttctcgctcccctcgctgtcgacgccgtcctcacagtcatcgat 230
Query: 556 cccgcccagcctgaaatggtcgatctccgtgatgttaagatcgtgaagaagctcggcggc 615
||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 231 cccgcccagcctgaaatggtcgatctccgcgatgttaagatcgtgaagaagcttgggggc 290
Query: 616 accgtcgacgataccgagctcgtcaggggccttgtctttgacaagaaggtgagccatgcc 675
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 accgtggacgataccgagctcgtcaggggccttgtctttgacaagaaggtgagccatgcc 350
Query: 676 gctggtggacctactcgcatggagaatg 703
||||||||||||||||||||||||||||
Sbjct: 351 gctggtggacctactcgcatggagaatg 378
Score = 329 bits (166), Expect = 3e-89
Identities = 169/170 (99%)
Strand = Plus / Plus
Query: 214 gtcctccaacccgccgccaagatgctcgtcgagctttccaagtctcaggactccgcagcc 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcctccaacccgccgccaagatgctcgtcgagctttccaagtctcaggactccgcagcc 60
Query: 274 ggtgacggaaccaccaccgtcgtcgttatcgctggcgcactcctcgagcagtgcctcctc 333
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcgacggaaccaccaccgtcgtcgttatcgctggcgcactcctcgagcagtgcctcctc 120
Query: 334 ctcctctcccgcggcatccaccccaccgtcatctccgattcactctacaa 383
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcctctcccgcggcatccaccccaccgtcatctccgattcactctacaa 170
Score = 190 bits (96), Expect = 2e-47
Identities = 99/100 (99%)
Strand = Plus / Plus
Query: 1485 ggagaatgtggtgcagccgctgctagtaagcacgagtgctatcaccttggcaacagagtg 1544
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 371 ggagaatgtggtgcagccgctgctagtaagcacgagtgctatcaccttggccacagagtg 430
Query: 1545 cgtgcggatgattttgaagattgatgatattgtaactgtg 1584
||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cgtgcggatgattttgaagattgatgatattgtaactgtg 470
>gnl|LJGI|TC73040 similar to UniRef100_Q9ZRX1 Cluster: T-complex protein 1, delta
subunit; n=1; Glycine max|Rep: T-complex protein 1,
delta subunit - Glycine max (Soybean), partial (8%)
Length = 465
Score = 97.6 bits (49), Expect = 2e-19
Identities = 112/132 (84%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 135 catggacaagatgatctccacctcctccgacgaggtcatcatcaccaacgacggcgccac 194
||||||||| |||||||| |||||||| | || |||| |||||| | |||| |||||
Sbjct: 206 catggacaatatgatctctacctcctctaatga--tcattatcaccgataacggtgccac 263
Query: 195 catcctcaacaagatgcaggtcctccaacccgccgccaagatgctcgtcgagctttccaa 254
|||||||||||||||||| || ||||||||||| |||||||||| |||||||| |||||
Sbjct: 264 catcctcaacaagatgcaagtattccaacccgccaccaagatgcttgtcgagctctccaa 323
Query: 255 gtctcaggactc 266
||| || |||||
Sbjct: 324 gtcccacgactc 335