Miyakogusa Predicted Gene

Lj0g3v0243179.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0243179.1 tr|G7IUV8|G7IUV8_MEDTR Polygalacturonase
OS=Medicago truncatula GN=MTR_2g103650 PE=4 SV=1,77.48,0,no
description,Pectin lyase fold; seg,NULL; Pectin lyase-like,Pectin
lyase fold/virulence factor; Pa,CUFF.15881.1
         (1236 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80731 similar to UniRef100_Q2KMJ7 Cluster: PGN; n=2; ...    56   5e-07

>gnl|LJGI|TC80731 similar to UniRef100_Q2KMJ7 Cluster: PGN; n=2; Glycine max|Rep: PGN
           - Glycine max (Soybean), partial (35%)
          Length = 869

 Score = 56.0 bits (28), Expect = 5e-07
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 733 atcaaaataactggtataacatgtggtccaggccatggtatcag 776
           ||||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 190 atcaacataactggtattacatgtggtcctggccatggcatcag 233