Miyakogusa Predicted Gene
- Lj0g3v0243159.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0243159.1 Non Chatacterized Hit- tr|I1KH25|I1KH25_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.92,0,DNA-binding
domain in plant proteins such as,AP2/ERF domain; AP2,AP2/ERF domain;
seg,NULL; DNA-bindi,CUFF.15880.1
(570 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AU088998 homologue to UniRef100_Q2HUA6 Cluster: Pathoge... 787 0.0
gnl|LJGI|BP035843 homologue to UniRef100_A7QIP9 Cluster: Chromos... 174 4e-43
gnl|LJGI|TC79408 similar to UniRef100_Q3E958 Cluster: Ethylene-r... 123 1e-27
gnl|LJGI|TC71562 homologue to UniRef100_A7P5Z2 Cluster: Chromoso... 68 6e-11
>gnl|LJGI|AU088998 homologue to UniRef100_Q2HUA6 Cluster: Pathogenesis-related
transcriptional factor and ERF; n=1; Medicago
truncatula|Rep: Pathogenesis-related transcriptional
factor and ERF - Medicago truncatula (Barrel medic),
partial (39%)
Length = 550
Score = 787 bits (397), Expect = 0.0
Identities = 407/412 (98%)
Strand = Plus / Plus
Query: 150 aattttgatgagtggaagaaacgccaaaactaacttcccagttgtggatgatcaaatggg 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattttgatgagtggaagaaacgccaaaactaacttcccagttgtggatgatcaaatggg 60
Query: 210 aaattctacttctgcttcattttccacaacattttctacagttctcagtgcaaagctgag 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaattctacttctgcttcattttccacaacattttctacagttctcagtgcaaagctgag 120
Query: 270 gaagtgcttcaagtccccttcaccttccctcacatgcctaaggcttgatgcagagaattc 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaagtgcttcaagtccccttcaccttccctcacatgcctaaggcttgatgcagagaattc 180
Query: 330 ccacttcggcgtgtggcagaagcaagccgggcctcgctccgaatcaaactggatcatgat 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccacttcggcgtgtggcagaagcaagccgggcctcgctccgaatcaaactggatcatgat 240
Query: 390 ggttgagttagaaaggaagaacaagaatgatcacagagcttcttctgattcagaattgcc 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggttgagttagaaaggaagaacaagaatgatcacagagcttcttctgattcagaattgcc 300
Query: 450 agagaagaataagcaagagaaggtaataaaaccagaagaaagtactaacaacaatggcat 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agagaagaataagcaagagaaggtaataaaaccagaagaaagtactaacaacaatggcat 360
Query: 510 ggatgaggagcagaggattgcactgcagatgatagaagaacttctgaacagg 561
|||||| ||||| | |||||||||||| |||||| |||||||||||||||||
Sbjct: 361 ggatgangagcanangattgcactgcanatgatanaagaacttctgaacagg 412
>gnl|LJGI|BP035843 homologue to UniRef100_A7QIP9 Cluster: Chromosome chr9
scaffold_104, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_104, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 393
Score = 174 bits (88), Expect = 4e-43
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 483 agaagaaagtactaacaacaatggcatggatgaggagcagaggattgcactgcagatgat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agaagaaagtactaacaacaatggcatggatgaggagcagaggattgcactgcagatgat 334
Query: 543 agaagaacttctgaacaggaattgaaga 570
||||||||||||||||||||||||||||
Sbjct: 333 agaagaacttctgaacaggaattgaaga 306
>gnl|LJGI|TC79408 similar to UniRef100_Q3E958 Cluster: Ethylene-responsive
transcription factor SHINE 3; n=1; Arabidopsis
thaliana|Rep: Ethylene-responsive transcription factor
SHINE 3 - Arabidopsis thaliana (Mouse-ear cress),
partial (65%)
Length = 943
Score = 123 bits (62), Expect = 1e-27
Identities = 128/150 (85%)
Strand = Plus / Plus
Query: 16 aagttcagaggtgtcaggcaacgccattggggctcttgggtttcagagattcgtcatcca 75
||||||||||| || ||||| ||||| |||||||| ||||| ||||||||||| || |||
Sbjct: 155 aagttcagaggagttaggcagcgccagtggggctcctgggtgtcagagattcgccaccca 214
Query: 76 ttattgaaaaggagggtgtggctgggaacatttgatactgctgaagaagcagctagagca 135
||| |||| || ||||||||||| ||||||||||| || || || | |||||| || |||
Sbjct: 215 ttactgaagagaagggtgtggctaggaacatttgagacagcagaggcagcagcaagggca 274
Query: 136 tatgacgaggcagcaattttgatgagtgga 165
|||||| | |||||||||||||||| ||||
Sbjct: 275 tatgaccaagcagcaattttgatgaatgga 304
>gnl|LJGI|TC71562 homologue to UniRef100_A7P5Z2 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 488
Score = 67.9 bits (34), Expect = 6e-11
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 40 cattggggctcttgggtttcagagattcgtcatccattattgaaaaggagggtgtggctg 99
||||||||||||||||| || || ||||| || || ||||||||| ||| | |||||
Sbjct: 133 cattggggctcttgggtctccgaaattcgacaccctatattgaaaactaggatatggctt 192
Query: 100 ggaacatttgatactgctgaagaagcagctagagcata 137
|| |||||||| |||||||| || ||||||||||||||
Sbjct: 193 gggacatttgaaactgctgaggatgcagctagagcata 230