Miyakogusa Predicted Gene
- Lj0g3v0243059.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0243059.1 tr|G7JS79|G7JS79_MEDTR Polygalacturonase-like
protein OS=Medicago truncatula GN=MTR_4g124980 PE=4 SV,93.86,0,Pectin
lyase-like,Pectin lyase fold/virulence factor; Parallel beta-helix
repeats,Parallel beta-heli,CUFF.15877.1
(837 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60630 similar to UniRef100_A7PDT4 Cluster: Chromosome... 979 0.0
gnl|LJGI|GO024306 similar to UniRef100_A7PDT4 Cluster: Chromosom... 365 e-100
gnl|LJGI|TC65028 similar to UniRef100_A7PDT4 Cluster: Chromosome... 281 3e-75
gnl|LJGI|BP057767 UniRef100_Q4J5B8 Cluster: Proton/sugar symport... 78 1e-13
>gnl|LJGI|TC60630 similar to UniRef100_A7PDT4 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 753
Score = 979 bits (494), Expect = 0.0
Identities = 494/494 (100%)
Strand = Plus / Plus
Query: 344 gggtttccaacgtcacggtggagaacctttttgtatgggattcccggcgtggtgtaagga 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtttccaacgtcacggtggagaacctttttgtatgggattcccggcgtggtgtaagga 60
Query: 404 ttaagactgcagctggacgaggaggatatgtgcgccaaataacttatcgaaacctaacgt 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaagactgcagctggacgaggaggatatgtgcgccaaataacttatcgaaacctaacgt 120
Query: 464 tcgagaatgtccgtgttggaattgttatgaagacagattacaacgagcaccctgatgatg 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgagaatgtccgtgttggaattgttatgaagacagattacaacgagcaccctgatgatg 180
Query: 524 ggtatgaccctacggcacttccagaaatcagagacataagcttcaccactgtccatggcc 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtatgaccctacggcacttccagaaatcagagacataagcttcaccactgtccatggcc 240
Query: 584 atggagttcgtgtgccggtgcgtatccatggtagtgaagcgattccggtgagaaatgtaa 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atggagttcgtgtgccggtgcgtatccatggtagtgaagcgattccggtgagaaatgtaa 300
Query: 644 cttttcgcgacatgtcagtagggttaacctacaagaagaagcacatctttcagtgtgcct 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttttcgcgacatgtcagtagggttaacctacaagaagaagcacatctttcagtgtgcct 360
Query: 704 ttgttgaaggccaagtaatagggaccatctttccttctccatgtgagaaccttgatcggt 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgttgaaggccaagtaatagggaccatctttccttctccatgtgagaaccttgatcggt 420
Query: 764 acaatgagcaaggacagctggttaagcattctgcatcccagaatgtaacagatatagatt 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaatgagcaaggacagctggttaagcattctgcatcccagaatgtaacagatatagatt 480
Query: 824 atgatttttgaggt 837
||||||||||||||
Sbjct: 481 atgatttttgaggt 494
>gnl|LJGI|GO024306 similar to UniRef100_A7PDT4 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 501
Score = 365 bits (184), Expect = e-100
Identities = 421/500 (84%)
Strand = Plus / Plus
Query: 208 gcaattgcgataaaaagtggctgggatcagtatggaattgcttatgcaaggccttccatg 267
|||||||| ||||||||||| ||||||||||||||||||||||||| || |||||||| |
Sbjct: 2 gcaattgcaataaaaagtgggtgggatcagtatggaattgcttatggaaagccttccaag 61
Query: 268 aatataatgatccgaaaccttgttgtccgttctatggtcagtgctggtgtctcaataggc 327
|||||||| |||||||||||||| || || |||| ||||||||||| |||||||||||
Sbjct: 62 aatataataatccgaaaccttgtggttcgctctaatgtcagtgctggcatctcaataggc 121
Query: 328 agtgagatgtctggcggggtttccaacgtcacggtggagaacctttttgtatgggattcc 387
|||||||||||||| ||||| ||||| ||||| ||||||||| || |||||||||| ||
Sbjct: 122 agtgagatgtctggtggggtatccaatgtcacagtggagaacgttcttgtatgggaatct 181
Query: 388 cggcgtggtgtaaggattaagactgcagctggacgaggaggatatgtgcgccaaataact 447
||||||| ||||||| ||||||||| ||||| |||| ||||||||||| |||||||||
Sbjct: 182 cggcgtgccataaggatcaagactgcacctggaagaggtggatatgtgcgacaaataact 241
Query: 448 tatcgaaacctaacgttcgagaatgtccgtgttggaattgttatgaagacagattacaac 507
|| || || ||||||||| | || |||||||||||||||||||| |||||| |||||||
Sbjct: 242 taccggaatctaacgttcaacaacgtccgtgttggaattgttatcaagacaaattacaat 301
Query: 508 gagcaccctgatgatgggtatgaccctacggcacttccagaaatcagagacataagcttc 567
|| |||||||||| ||| ||||| || |||| |||||| | | || |||||||| |||
Sbjct: 302 gaacaccctgatgctggatatgatcccctggcatttccagtacttagtgacataagtttc 361
Query: 568 accactgtccatggccatggagttcgtgtgccggtgcgtatccatggtagtgaagcgatt 627
| || ||| | |||||| |||||||| |||||||| ||||| | |||||| ||| |||
Sbjct: 362 atcaatgtgcgtggccagggagttcgcgtgccggtacgtattgaaggtagtaaagaaatt 421
Query: 628 ccggtgagaaatgtaacttttcgcgacatgtcagtagggttaacctacaagaagaagcac 687
| || |||||||| ||||| | |||||| || || |||||||||||||||||||
Sbjct: 422 tcagttagaaatgtgactttccaggacatgaatgttggcataacctacaagaagaagcat 481
Query: 688 atctttcagtgtgcctttgt 707
||||| ||||||||||||||
Sbjct: 482 atcttccagtgtgcctttgt 501
>gnl|LJGI|TC65028 similar to UniRef100_A7PDT4 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 911
Score = 281 bits (142), Expect = 3e-75
Identities = 403/490 (82%)
Strand = Plus / Plus
Query: 337 tctggcggggtttccaacgtcacggtggagaacctttttgtatgggattcccggcgtggt 396
||||| ||||| ||||| ||||| ||||||||| || |||||||||| || |||||||
Sbjct: 73 tctggtggggtatccaatgtcacagtggagaacgttcttgtatgggaatctcggcgtgcc 132
Query: 397 gtaaggattaagactgcagctggacgaggaggatatgtgcgccaaataacttatcgaaac 456
||||||| ||||||||| ||||| |||| ||||||||| | ||||||||||| || ||
Sbjct: 133 ataaggatcaagactgcacctggaagaggtggatatgtgtgacaaataacttaccggaat 192
Query: 457 ctaacgttcgagaatgtccgtgttggaattgttatgaagacagattacaacgagcaccct 516
||||||||| | || |||||||||||||||||||| |||||| ||||||| || ||||||
Sbjct: 193 ctaacgttcaacaacgtccgtgttggaattgttatcaagacaaattacaatgaacaccct 252
Query: 517 gatgatgggtatgaccctacggcacttccagaaatcagagacataagcttcaccactgtc 576
|||| ||| ||||| || |||| |||||| | | || |||||||| |||| || |||
Sbjct: 253 gatgctggatatgatcccctggcatttccagtacttagtgacataagtttcatcaatgtg 312
Query: 577 catggccatggagttcgtgtgccggtgcgtatccatggtagtgaagcgattccggtgaga 636
| |||||| |||||||| |||||||| ||||| | |||||| ||| ||| | || |||
Sbjct: 313 cgtggccagggagttcgcgtgccggtacgtattgaaggtagtaaagaaatttcagttaga 372
Query: 637 aatgtaacttttcgcgacatgtcagtagggttaacctacaagaagaagcacatctttcag 696
||||| ||||| | |||||| || || ||||||||||||||||||| ||||| |||
Sbjct: 373 aatgtgactttccaggacatgaatgttggcataacctacaagaagaagcatatcttccag 432
Query: 697 tgtgcctttgttgaaggccaagtaatagggaccatctttccttctccatgtgagaacctt 756
||||||||||| ||||| | |||||||| || ||||||||| |||| |||| |||| ||
Sbjct: 433 tgtgcctttgtcgaaggtcgggtaataggtactatctttcctgctccctgtgggaacttt 492
Query: 757 gatcggtacaatgagcaaggacagctggttaagcattctgcatcccagaatgtaacagat 816
|||| |||||||| ||||| |||||||||||||| ||| || ||||||||||||| |
Sbjct: 493 gatcaatacaatgaacaaggggagctggttaagcatgctgtgtcacagaatgtaacaggt 552
Query: 817 atagattatg 826
||||||||||
Sbjct: 553 atagattatg 562
>gnl|LJGI|BP057767 UniRef100_Q4J5B8 Cluster: Proton/sugar symporter LacY precursor;
n=1; Azotobacter vinelandii AvOP|Rep: Proton/sugar,
partial (2%)
Length = 311
Score = 77.8 bits (39), Expect = 1e-13
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 767 atgagcaaggacagctggttaagcattctgcatcccagaatgtaacagatatagattatg 826
|||||| ||||| ||||||||||| || |||||||| | |||| || |||||||||||||
Sbjct: 308 atgagccaggaccgctggttaagccttttgcatccccggatgttaccgatatagattatg 249
Query: 827 atttttgaggt 837
|||||||||||
Sbjct: 248 atttttgaggt 238