Miyakogusa Predicted Gene
- Lj0g3v0242929.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0242929.1 tr|G7JBC0|G7JBC0_MEDTR Protein transport protein
Sec23 OS=Medicago truncatula GN=MTR_3g084740 PE=4 S,83.45,0,PROTEIN
TRANSPORT PROTEIN SEC23,NULL; no description,NULL;
Sec23_trunk,Sec23/Sec24, trunk domain; Se,CUFF.16082.1
(2121 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77368 similar to UniRef100_A7QQS7 Cluster: Chromosome... 2032 0.0
gnl|LJGI|TC62100 similar to UniRef100_A7QQS7 Cluster: Chromosome... 1273 0.0
gnl|LJGI|TC69196 similar to UniRef100_A7QQS7 Cluster: Chromosome... 613 e-174
gnl|LJGI|AV427057 homologue to UniRef100_A7LIT7 Cluster: Transpo... 226 4e-58
gnl|LJGI|FS322399 similar to UniRef100_A7QJV5 Cluster: Chromosom... 98 3e-19
gnl|LJGI|TC76285 similar to UniRef100_Q93ZN7 Cluster: At1g05520/... 88 3e-16
gnl|LJGI|TC61792 homologue to UniRef100_A7QQS7 Cluster: Chromoso... 72 2e-11
>gnl|LJGI|TC77368 similar to UniRef100_A7QQS7 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(55%)
Length = 1808
Score = 2032 bits (1025), Expect = 0.0
Identities = 1025/1025 (100%)
Strand = Plus / Plus
Query: 1035 ccagggtcacgttttagatctttttgcatcagctcttgatcaggttggggttgcagaaat 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccagggtcacgttttagatctttttgcatcagctcttgatcaggttggggttgcagaaat 60
Query: 1095 gaaagttgcagttgaaaaaactggtggccttgttgtcctgtctgaaagttttggccattc 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaagttgcagttgaaaaaactggtggccttgttgtcctgtctgaaagttttggccattc 120
Query: 1155 agtcttcaaggactcttttaagcgtgtcttcgaggatggggagcaatctcttggtctttg 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtcttcaaggactcttttaagcgtgtcttcgaggatggggagcaatctcttggtctttg 180
Query: 1215 tttcaatggaacactagagataaattgctccaaggaaataaaaattcagggtataattgg 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttcaatggaacactagagataaattgctccaaggaaataaaaattcagggtataattgg 240
Query: 1275 accttgcacatcactggaaaagaaagggccttctgttgctgatactgtgataggacaggg 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accttgcacatcactggaaaagaaagggccttctgttgctgatactgtgataggacaggg 300
Query: 1335 aaacacaacagcttggaaaatgtgtggccttgacaagagtacacacttgactgtgatgtt 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaacacaacagcttggaaaatgtgtggccttgacaagagtacacacttgactgtgatgtt 360
Query: 1395 tgatctttcatcaagtgatcgttcaaacactccaagtgctaacaatcaacagttgtacct 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgatctttcatcaagtgatcgttcaaacactccaagtgctaacaatcaacagttgtacct 420
Query: 1455 gcagttcgttacaagttaccagagtccagatggtcaatcaatgcttcgggtcacaacagt 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcagttcgttacaagttaccagagtccagatggtcaatcaatgcttcgggtcacaacagt 480
Query: 1515 aactagaagatgggtagatggtgctgatagttctgaggaattgattcaaggatttgacca 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aactagaagatgggtagatggtgctgatagttctgaggaattgattcaaggatttgacca 540
Query: 1575 agaaactgctgctgttgtcatggctagacttgcttctctaaaaatggagacagaggaggc 1634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaaactgctgctgttgtcatggctagacttgcttctctaaaaatggagacagaggaggc 600
Query: 1635 atttgatgcaacacggtggttggaccgagcacttatccgcctttgctctaaatttggtga 1694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atttgatgcaacacggtggttggaccgagcacttatccgcctttgctctaaatttggtga 660
Query: 1695 ctaccgcaaagatgaaccatcttcttttacattaaacccttcattttcattattacccca 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctaccgcaaagatgaaccatcttcttttacattaaacccttcattttcattattacccca 720
Query: 1755 gtttatgttcaatttgcgaaggtcgcaatttgtacaggtgtttaataacagtccagacga 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtttatgttcaatttgcgaaggtcgcaatttgtacaggtgtttaataacagtccagacga 780
Query: 1815 aactgcatacttccgcatgttgttaaacagggaaaatataagcaatgctggtgtcatgat 1874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aactgcatacttccgcatgttgttaaacagggaaaatataagcaatgctggtgtcatgat 840
Query: 1875 tcagccatctctgatatcatattcattcaattcattgcctgcacccgcactattagatgt 1934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tcagccatctctgatatcatattcattcaattcattgcctgcacccgcactattagatgt 900
Query: 1935 gtcttctatttcagcagaccggattctgctacttgattcatattttagtgtggttatttt 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtcttctatttcagcagaccggattctgctacttgattcatattttagtgtggttatttt 960
Query: 1995 tcatggaatgacaatagctcaatggcgcaacttggggtaccagaaccagccagaacatca 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tcatggaatgacaatagctcaatggcgcaacttggggtaccagaaccagccagaacatca 1020
Query: 2055 ggcat 2059
|||||
Sbjct: 1021 ggcat 1025
>gnl|LJGI|TC62100 similar to UniRef100_A7QQS7 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (25%)
Length = 816
Score = 1273 bits (642), Expect = 0.0
Identities = 642/642 (100%)
Strand = Plus / Plus
Query: 1 atggcgcacttagcagatccagaaggcattgacggcgtacgcatgacctggaacgtctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atggcgcacttagcagatccagaaggcattgacggcgtacgcatgacctggaacgtctgg 234
Query: 61 ccacggagcaaagtcgaagccagcaaatgcgtaatccctctcgccgccacaatccccgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ccacggagcaaagtcgaagccagcaaatgcgtaatccctctcgccgccacaatccccgtc 294
Query: 121 accatccctcaccactaccaccacgacatccccaccgtcccttacaccccactccgctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 accatccctcaccactaccaccacgacatccccaccgtcccttacaccccactccgctgc 354
Query: 181 aagtcatgctcctccctccttaaccccttctgcatcgtcgatttcaccgccaagatctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aagtcatgctcctccctccttaaccccttctgcatcgtcgatttcaccgccaagatctgg 414
Query: 241 atctgccccttctgcttctcccgcaataccttccctcctcactacgcccaaatctccccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atctgccccttctgcttctcccgcaataccttccctcctcactacgcccaaatctccccc 474
Query: 301 accaatctccccgctgagctttacccccaatacaccaccctccaatacaccatccctaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 accaatctccccgctgagctttacccccaatacaccaccctccaatacaccatccctaac 534
Query: 361 cccaatcccaatccgcaaccccatgtcttcctcttcctcctcgacacctgcatcatccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cccaatcccaatccgcaaccccatgtcttcctcttcctcctcgacacctgcatcatccct 594
Query: 421 gaggagatggattacgtcaaatccgcgcttcaacgagccattggccttctccctgataat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gaggagatggattacgtcaaatccgcgcttcaacgagccattggccttctccctgataat 654
Query: 481 gctcttgtgggtttcatctcgtttgggacccaggttcaggttcacgagctcgcgttttcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gctcttgtgggtttcatctcgtttgggacccaggttcaggttcacgagctcgcgttttcc 714
Query: 541 gacatgtctaaggtttatgtcttccgcgggaacaaggagattacgaaggatcaggttttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gacatgtctaaggtttatgtcttccgcgggaacaaggagattacgaaggatcaggttttg 774
Query: 601 gagcagttgggccttggtggtagtggcgttgctaggccttat 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gagcagttgggccttggtggtagtggcgttgctaggccttat 816
>gnl|LJGI|TC69196 similar to UniRef100_A7QQS7 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(33%)
Length = 817
Score = 613 bits (309), Expect = e-174
Identities = 585/677 (86%)
Strand = Plus / Plus
Query: 700 ttcttgctgcctgcttctgactgtgaatacactctcaattcggtgttggatgaattggaa 759
|||||| ||||||| || || |||||||||||||||||| || || | || |||||| ||
Sbjct: 137 ttcttgatgcctgcgtcggattgtgaatacactctcaatgcgctgctcgacgaattgcaa 196
Query: 760 aatgatcagtggcctgttccgccggggagtcgtcaggctcgatgcaccggagtggcgttg 819
| ||||||||||| ||||| || || | || | ||||| || || || || || |||
Sbjct: 197 accgatcagtggccggttccacctggccgccgccccgctcgctgtactggtgttgccttg 256
Query: 820 agtgttgcggcagggttgcttggtgcttgtagtcctgggactggtgctagaatcattgct 879
|||||||| || || |||||| ||||||||| ||||||||| || ||||||||||| |||
Sbjct: 257 agtgttgctgccggtttgcttagtgcttgtaatcctgggacgggggctagaatcatagct 316
Query: 880 ttggttgggggtccatgcactgaagggcctggcacgattgtgtcaaaagatctatctgac 939
||||||||||| || ||||| ||||| || |||||||||||||||||||| || || |||
Sbjct: 317 ttggttgggggaccctgcacagaaggacccggcacgattgtgtcaaaagacctgtcagac 376
Query: 940 ccagtgcgttctcataaagatcttgataaagatgctgccccatacttcaagaaagcagtc 999
|| ||||| |||||||| ||||| |||||||| || || |||| ||| ||||||||||||
Sbjct: 377 cctgtgcgctctcataaggatctcgataaagacgcagcaccattctttaagaaagcagtc 436
Query: 1000 aaattttatgagggtctggcaaagcagctggttagccagggtcacgttttagatcttttt 1059
||||| |||||| |||| || || ||||| |||||||||||||| ||||| |||||||||
Sbjct: 437 aaattctatgagagtctcgcgaaacagcttgttagccagggtcatgttttggatcttttt 496
Query: 1060 gcatcagctcttgatcaggttggggttgcagaaatgaaagttgcagttgaaaaaactggt 1119
|||||||| ||||| |||||||| ||||||||||||||||||| ||||||| |||||||
Sbjct: 497 gcatcagcacttgaccaggttggagttgcagaaatgaaagttgtggttgaaagaactggt 556
Query: 1120 ggccttgttgtcctgtctgaaagttttggccattcagtcttcaaggactcttttaagcgt 1179
||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 557 ggccttgttgtcctggctgaaagttttggtcattcagtcttcaaggactcttttaagcat 616
Query: 1180 gtcttcgaggatggggagcaatctcttggtctttgtttcaatggaacactagagataaat 1239
|| || ||||| ||||||||||||||||| |||||||| ||||||||| | |||||||||
Sbjct: 617 gtttttgaggaaggggagcaatctcttggactttgttttaatggaacatttgagataaat 676
Query: 1240 tgctccaaggaaataaaaattcagggtataattggaccttgcacatcactggaaaagaaa 1299
|| || |||||||| ||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 677 tgttcaaaggaaatcaaaattcagggaataattggaccttgcacgtcgttggaaaagaaa 736
Query: 1300 gggccttctgttgctgatactgtgataggacagggaaacacaacagcttggaaaatgtgt 1359
| |||||||||| |||||||||| |||||| |||| |||||||| || ||||| ||||||
Sbjct: 737 gagccttctgtttctgatactgttataggagaggggaacacaactgcatggaagatgtgt 796
Query: 1360 ggccttgacaagagtac 1376
|| ||||||||||||||
Sbjct: 797 ggtcttgacaagagtac 813
>gnl|LJGI|AV427057 homologue to UniRef100_A7LIT7 Cluster: Transport protein; n=1;
Corchorus olitorius|Rep: Transport protein - Corchorus
olitorius, partial (33%)
Length = 265
Score = 226 bits (114), Expect = 4e-58
Identities = 195/222 (87%)
Strand = Plus / Plus
Query: 1687 tttggtgactaccgcaaagatgaaccatcttcttttacattaaacccttcattttcatta 1746
||||||||||||||||| ||||| ||||| ||||||||||||||||| || ||||| |
Sbjct: 44 tttggtgactaccgcaaggatgatccatcatcttttacattaaacccgtcgttttcgctg 103
Query: 1747 ttaccccagtttatgttcaatttgcgaaggtcgcaatttgtacaggtgtttaataacagt 1806
|| |||||||||||||||||| | ||| | || || ||||||||||| ||||| ||||||
Sbjct: 104 ttcccccagtttatgttcaatcttcgacgctcacagtttgtacaggtttttaacaacagt 163
Query: 1807 ccagacgaaactgcatacttccgcatgttgttaaacagggaaaatataagcaatgctggt 1866
||||| || ||||||||||||||||||||||||||| |||||||||| || ||||| |
Sbjct: 164 ccagatgagactgcatacttccgcatgttgttaaaccgggaaaatattagtaatgcagcc 223
Query: 1867 gtcatgattcagccatctctgatatcatattcattcaattca 1908
|||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 224 gtcatgattcagccatctctaatatcatattcatttaattca 265
>gnl|LJGI|FS322399 similar to UniRef100_A7QJV5 Cluster: Chromosome undetermined
scaffold_108, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (29%)
Length = 812
Score = 97.6 bits (49), Expect = 3e-19
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 192 ctccctccttaaccccttctgcatcgtcgatttcaccgccaagatctggatctgcccctt 251
|||| |||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 327 ctccatcctcaaccccttctgcatggtcgacttcgtcgccaagatctggatctgcccctt 386
Query: 252 ctgcttctcccgcaataccttccctcctcactacgcc 288
||||||| |||||| |||||| ||||||||||||
Sbjct: 387 ctgcttcaaccgcaaccacttcccccctcactacgcc 423
>gnl|LJGI|TC76285 similar to UniRef100_Q93ZN7 Cluster: At1g05520/T25N20_16; n=1;
Arabidopsis thaliana|Rep: At1g05520/T25N20_16 -
Arabidopsis thaliana (Mouse-ear cress), partial (15%)
Length = 533
Score = 87.7 bits (44), Expect = 3e-16
Identities = 161/200 (80%)
Strand = Plus / Plus
Query: 158 tcccttacaccccactccgctgcaagtcatgctcctccctccttaaccccttctgcatcg 217
|||| ||| |||| ||||||||||| | ||| ||||| ||| ||||||||| | ||
Sbjct: 238 tcccgtactcccctctccgctgcaaaacctgcacctccgccctcaaccccttcgcccgcg 297
Query: 218 tcgatttcaccgccaagatctggatctgccccttctgcttctcccgcaataccttccctc 277
|||| |||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 298 tcgacttcaccgccaagatctggatctgccccttctgctatcaacgcaaccatttccctc 357
Query: 278 ctcactacgcccaaatctcccccaccaatctccccgctgagctttacccccaatacacca 337
|||||||| | |||||| ||||||||||||| ||| || ||||| ||||||||||
Sbjct: 358 ctcactacaacgccatctccgagaccaatctccccggtgaactctaccctcaatacacca 417
Query: 338 ccctccaatacaccatccct 357
|| || |||||||| |||||
Sbjct: 418 ccgtcgaatacaccctccct 437
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 388 ttcctcttcctcctcgacacctgcatcatccctgaggagat 428
|||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 483 ttcctcttcctcctcgacacctgcctcatcgccgaggagat 523
>gnl|LJGI|TC61792 homologue to UniRef100_A7QQS7 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(13%)
Length = 904
Score = 71.9 bits (36), Expect = 2e-11
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 2008 atagctcaatggcgcaacttggggtaccagaaccagccagaacatcaggcat 2059
|||||||| |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 2 atagctcagtggcgcaacttgggataccagaaccaaccagaacaccaggcat 53