Miyakogusa Predicted Gene

Lj0g3v0242399.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0242399.1 tr|E9HLF4|E9HLF4_DAPPU Ubiquitin
carboxyl-terminal hydrolase OS=Daphnia pulex GN=DAPPUDRAFT_261673
P,30.88,2e-18,seg,NULL; Cysteine proteinases,NULL; DUSP-like,NULL;
UCH_2_3,Peptidase C19, ubiquitin carboxyl-termi,CUFF.15851.1
         (942 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC593655 similar to UniRef100_Q9SCJ9 Cluster: Ubiquitin...  1015   0.0  

>gnl|LJGI|DC593655 similar to UniRef100_Q9SCJ9 Cluster: Ubiquitin carboxyl-terminal
           hydrolase 26; n=1; Arabidopsis thaliana|Rep: Ubiquitin
           carboxyl-terminal hydrolase 26 - Arabidopsis thaliana
           (Mouse-ear cress), partial (4%)
          Length = 554

 Score = 1015 bits (512), Expect = 0.0
 Identities = 543/554 (98%)
 Strand = Plus / Plus

                                                                       
Query: 72  gggaactgctgcgaatagtggtcattatattgctcacatcaaggatgagaacactgggca 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gggaactgctgcgaatagtggtcattatattgctcacatcaaggatgagaacactgggca 60

                                                                       
Query: 132 atggtgggaatttgatgatgagcatgttactaacttgggtcgtcatccatttggcgaaga 191
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atggtgggaatttgatgatgagcatgttactaacttgggtcgtcatccatttggcgaaga 120

                                                                       
Query: 192 agcttcatgtccaacttctaaatctgttaaaactgatgtagataattctaatatctctga 251
           ||||||||||||||||||||||||||||| |  || ||||||||||||||||||||||||
Sbjct: 121 agcttcatgtccaacttctaaatctgttagaggtggtgtagataattctaatatctctga 180

                                                                       
Query: 252 agcaatggtaactgacaacaatggaaatggtttaagcaccactcactcacaatcctcgca 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcaatggtaactgacaacaatggaaatggtttaagcaccactcactcacaatcctcgca 240

                                                                       
Query: 312 agtagagacattttcatctagtgatgcatacatgttgatgtaccaccttaagcgcaccaa 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtagagacattttcatctagtgatgcatacatgttgatgtaccaccttaagcgcaccaa 300

                                                                       
Query: 372 aaatgttgatgaaaaggggggcatggtttgtggtgctaaccatcgagaaagtgatgacgg 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaatgttgatgaaaaggggggcatggtttgtggtgctaaccatcgagaaagtgatgacgg 360

                                                                       
Query: 432 tgcagttactgcacacgaaaatggttgtcttccttctcatttttctgaagagattcaaaa 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||
Sbjct: 361 tgcagttactgcacacgaaaatggttgtcttccttctcatttttctgaagagaattcaaa 420

                                                                       
Query: 492 tttcaatgcttcatatgttgatgcctgtgagcaatactctcataggaaagagttagaagt 551
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttcaatgcttcatatgttgatgcctgtgagcaatactctcataggaaagagttagaagt 480

                                                                       
Query: 552 gagtcgtatcaacgagaggaaacaggaagttcgatctgttttagcagaagctcctgttca 611
           |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 481 gagtcgtatncacgagaggaaacaggaagttcgatctgttttagcagaagctcctgttnc 540

                         
Query: 612 accgttggagcaac 625
           ||||||||||||||
Sbjct: 541 accgttggagcaac 554