Miyakogusa Predicted Gene

Lj0g3v0242199.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0242199.1 Non Chatacterized Hit- tr|K4D5A4|K4D5A4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,63.14,0,Aa_trans,Amino acid transporter, transmembrane;
SUBFAMILY NOT NAMED,NULL; AMINO ACID TRANSPORTER,NUL,CUFF.15830.1
         (732 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO006093 similar to UniRef100_A7PI10 Cluster: Chromosom...    84   1e-15

>gnl|LJGI|GO006093 similar to UniRef100_A7PI10 Cluster: Chromosome chr13 scaffold_17,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_17, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 719

 Score = 83.8 bits (42), Expect = 1e-15
 Identities = 96/114 (84%)
 Strand = Plus / Plus

                                                                       
Query: 133 cagaggaaacccagttcttacagcatagcatggcctcaaagttacaggcaatccattgat 192
           |||||||| || ||||| |||| |||  |||||||||| ||||||||||| || ||||||
Sbjct: 563 cagaggaagcctagttcctacaacatctcatggcctcagagttacaggcagtctattgat 622

                                                                 
Query: 193 ctatatggtagcgtgccatcaccaaacataggatttttgggcaccccatcattg 246
           || ||  |||| |||||||||||||| || |||||| ||||||| || ||||||
Sbjct: 623 ctctacagtagtgtgccatcaccaaatattggatttctgggcactccctcattg 676