Miyakogusa Predicted Gene

Lj0g3v0241739.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0241739.1 tr|Q9M6R6|Q9M6R6_VIGRR RNA helicase OS=Vigna
radiata var. radiata GN=VRH1 PE=2 SV=1,81.84,0,DEAD,DNA/RNA helicase,
DEAD/DEAH box type, N-terminal; HELICASE_ATP_BIND_1,Helicase,
superfamily 1/2,CUFF.15795.1
         (1029 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS335918 similar to UniRef100_A7QGV9 Cluster: Chromosom...   198   5e-50

>gnl|LJGI|FS335918 similar to UniRef100_A7QGV9 Cluster: Chromosome chr16 scaffold_94,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_94, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 597

 Score =  198 bits (100), Expect = 5e-50
 Identities = 178/204 (87%)
 Strand = Plus / Plus

                                                                       
Query: 141 gaagaaggaggatcctaatgcggtttctaaattcaggatatccgggccgttgagggaaat 200
           ||||||||||||||| ||||||||||| |  |||||||| || | |||||||||||  ||
Sbjct: 393 gaagaaggaggatccgaatgcggtttcgaggttcaggatttcggagccgttgagggcgat 452

                                                                       
Query: 201 gttgaaggagaaggggattgtgtcgttgtttcccattcaggctatgacttttgacaccgt 260
             ||||| ||||||||||||  ||| |||| ||||||||||||||||| ||||| ||| |
Sbjct: 453 tctgaagcagaaggggattgaatcgctgttccccattcaggctatgacgtttgataccat 512

                                                                       
Query: 261 tcttgatggttctgatttggttggtcgggctcgcactggtcagggtaaaactctggcctt 320
           ||| |||||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 513 tctcgatggtgctgatatggttggtcgcgctcgtactggtcagggtaaaactctggcctt 572

                                   
Query: 321 tgtgttgcccatattggagtcttt 344
           ||||||||||||| | ||||||||
Sbjct: 573 tgtgttgcccatacttgagtcttt 596