Miyakogusa Predicted Gene

Lj0g3v0241459.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0241459.1 Non Chatacterized Hit- tr|I1PNB0|I1PNB0_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3 SV=1,59.49,2e-19,no
description,NAD(P)-binding domain; GDHRDH,Glucose/ribitol
dehydrogenase; NAD(P)-binding Rossmann-,CUFF.15772.1
         (243 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP049500 similar to UniRef100_A7PZ76 Cluster: Chromosom...   402   e-112
gnl|LJGI|BP084345 weakly similar to UniRef100_Q2HVK6 Cluster: Sh...    70   7e-12
gnl|LJGI|BP028509 similar to UniRef100_A7PZ77 Cluster: Chromosom...    68   3e-11
gnl|LJGI|TC63326 similar to UniRef100_A7PZ77 Cluster: Chromosome...    62   2e-09
gnl|LJGI|TC81069 weakly similar to UniRef100_A7PZ77 Cluster: Chr...    52   2e-06

>gnl|LJGI|BP049500 similar to UniRef100_A7PZ76 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 505

 Score =  402 bits (203), Expect = e-112
 Identities = 233/243 (95%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtctgcatatacaatctcaaaagttgctctgaatgcctacacaaggattctggccaag 60
           |||||||||||||| ||||| ||||||||||||||||||||| | |||||||| ||| ||
Sbjct: 422 atgtctgcatataccatctccaaagttgctctgaatgcctaccccaggattctagcccag 363

                                                                       
Query: 61  aaatacccttcattctgcatcaatgctgtttgccctggttatgtcaaaacggatatcaac 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 362 aaatacccttcattctgcatcaatgctgtttgccctggttatgtccaaacggatatcaac 303

                                                                       
Query: 121 tacaatacaggtctcctaacacctgatgaaggtgctgaagctgctgtcaggttggcactg 180
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 taccatacaggtctcctaacacctgatgaaggtgctgaagctgctgtcaggttggcactg 243

                                                                       
Query: 181 ctacctgatggtagtagtccttctggccttttcttctatcgaagtgaagagaaaccattt 240
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 242 ctacctgatggtagtagtccttctggccctttcttctatcgaagtgaagagaaacccttt 183

              
Query: 241 taa 243
           |||
Sbjct: 182 taa 180


>gnl|LJGI|BP084345 weakly similar to UniRef100_Q2HVK6 Cluster: Short-chain
           dehydrogenase/reductase SDR; n=1; Medicago
           truncatula|Rep: Short-chain dehydrogenase/reductase SDR
           - Medicago truncatula (Barrel medic), partial (38%)
          Length = 366

 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 22  aaagttgctctgaatgcctacacaaggattctggccaagaaatacccttcattctgcatc 81
           |||| |||| |||||||||||||||| ||||| |||| ||||||| |  | |||||||||
Sbjct: 247 aaagctgctatgaatgcctacacaagaattcttgccaggaaatacaccactttctgcatc 188

                                  
Query: 82  aatgctgtttgccctggttatgt 104
           |||  |||||||||||| |||||
Sbjct: 187 aatagtgtttgccctggctatgt 165


>gnl|LJGI|BP028509 similar to UniRef100_A7PZ77 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (44%)
          Length = 551

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                       
Query: 22  aaagttgctctgaatgcctacacaaggattctggccaagaaatacccttcattctgcatc 81
           |||| |||| |||||||||| ||||| ||||| |||| |||||||||  | |||||||||
Sbjct: 342 aaagctgctatgaatgcctatacaagaattcttgccaggaaataccccactttctgcatc 283

                                
Query: 82  aatgctgtttgccctggttat 102
           |||  |||||||| |||||||
Sbjct: 282 aatagtgtttgccntggttat 262


>gnl|LJGI|TC63326 similar to UniRef100_A7PZ77 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (89%)
          Length = 1052

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                       
Query: 22  aaagttgctctgaatgcctacacaaggattctggccaagaaatacccttcattctgcatc 81
           |||| |||| |||||||||| ||||| ||||| |||| |||||||||  | || ||||||
Sbjct: 710 aaagctgctatgaatgcctatacaagaattcttgccaggaaataccccactttttgcatc 769

                                              
Query: 82  aatgctgtttgccctggttatgtcaaaacggatat 116
           |||  |||||||||||| | |||||| || |||||
Sbjct: 770 aatagtgtttgccctggatttgtcaagacagatat 804


>gnl|LJGI|TC81069 weakly similar to UniRef100_A7PZ77 Cluster: Chromosome chr15
           scaffold_40, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr15 scaffold_40, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (49%)
          Length = 1221

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 22  aaagttgctctgaatgcctacacaaggattctggccaagaaatacccttcattctgcatc 81
           |||| |||| |||||||||| ||||| ||||| |||| |||||||||  | |||||||||
Sbjct: 223 aaagctgctatgaatgcctatacaagaattcttgccaggaaataccccactttctgcatc 282

             
Query: 82  aa 83
           ||
Sbjct: 283 aa 284