Miyakogusa Predicted Gene
- Lj0g3v0241299.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0241299.1 Non Chatacterized Hit- tr|I1MZC5|I1MZC5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38149
PE,75.5,0,seg,NULL; XH,Uncharacterised domain XH; TRANSCRIPTION FACTOR
X1-LIKE,NULL; RIBONUCLEASE P PROTEIN
SU,gene.Ljchr0_pseudomol_20120828.path1.gene24822.1
(468 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61574 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 720 0.0
gnl|LJGI|TC78612 similar to UniRef100_A7PIT9 Cluster: Chromosome... 289 8e-78
gnl|LJGI|BW596862 weakly similar to UniRef100_A7NYZ4 Cluster: Ch... 287 3e-77
gnl|LJGI|GO010457 weakly similar to UniRef100_A7PIT9 Cluster: Ch... 174 3e-43
gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 167 8e-41
>gnl|LJGI|TC61574 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (30%)
Length = 941
Score = 720 bits (363), Expect = 0.0
Identities = 426/447 (95%)
Strand = Plus / Plus
Query: 22 tacattaaagagacgtcatttcgatcctatattaagctgaagagaatgggggaaatggac 81
||||||||||||||||||| |||| | | |||||| ||||||||||||||||| |||||
Sbjct: 220 tacattaaagagacgtcatctcgaggccacattaaggtgaagagaatgggggaactggac 279
Query: 82 actggaccattcctcgaagccatgaagaaaagatataatgaagaggaagctgaagagaga 141
|||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 280 actggaccgttccttgaagccatgaagaaaagatataatgaggaggaagctgaagagaga 339
Query: 142 gcttcagaactatgttcattgtgggcagaatatctgaaggacccagattggcatccattc 201
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gcttcagaactgtgttcattgtgggcagaatatctgaaggacccagattggcatccattc 399
Query: 202 aaagttgtcataattgaagggaaagaaaaggagattattaaagatgacgatgaaaagttg 261
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 400 agagttgtcataattgaagggaaagaaaaggagataattaaagatgacgatgaaaagttg 459
Query: 262 aatgggctaaaaaatgacatcggtgaaggggcgtataaagcagtggtgactgctttaaca 321
||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 460 aatggcctaaaaaatgaaatcggtgaaggggcgtataaagcagtgatgactgctttaaca 519
Query: 322 gagataaacgaatacaatcccagtgggcgatacataacctcagaattatggaactatgaa 381
|||||||| || ||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 520 gagataaatgattacaatcccagtgggcgatacataacctcagaattgtggaactataaa 579
Query: 382 gagggaaggagagcaactctgaaagaaggagcgcaagttctgttgaagcattgggaaatg 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 580 gagggaaggagagcaactctgaaagaaggagcgcaagttctgttgaagcattgggaagtg 639
Query: 442 gttaaaagcaagaggggaatgatgtga 468
|||||||||||||||||||||||||||
Sbjct: 640 gttaaaagcaagaggggaatgatgtga 666
>gnl|LJGI|TC78612 similar to UniRef100_A7PIT9 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 1863
Score = 289 bits (146), Expect = 8e-78
Identities = 182/194 (93%)
Strand = Plus / Plus
Query: 22 tacattaaagagacgtcatttcgatcctatattaagctgaagagaatgggggaaatggac 81
||||||||||||||||||| |||| | | |||||| ||||||||||||||||| |||||
Sbjct: 1664 tacattaaagagacgtcatctcgaggccacattaaggtgaagagaatgggggaactggac 1723
Query: 82 actggaccattcctcgaagccatgaagaaaagatataatgaagaggaagctgaagagaga 141
|||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1724 actggaccgttccttgaagccatgaagaaaagatataatgaggaggaagctgaagagaga 1783
Query: 142 gcttcagaactatgttcattgtgggcagaatatctgaaggacccagattggcatccattc 201
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1784 gcttcagaactgtgttcattgtgggcagaatatctgaaggacccagattggcatccattc 1843
Query: 202 aaagttgtcataat 215
| ||||||||||||
Sbjct: 1844 agagttgtcataat 1857
>gnl|LJGI|BW596862 weakly similar to UniRef100_A7NYZ4 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 490
Score = 287 bits (145), Expect = 3e-77
Identities = 163/169 (96%)
Strand = Plus / Plus
Query: 268 ctaaaaaatgacatcggtgaaggggcgtataaagcagtggtgactgctttaacagagata 327
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 322 ctaaaaaatgaaatcggtgaaggggcgtataaagcagtgatgactgctttaacagagata 381
Query: 328 aacgaatacaatcccagtgggcgatacataacctcagaattatggaactatgaagaggga 387
|| || ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 382 aatgattacaatcccagtgggcgatacataacctcagaattgtggaactataaagaggga 441
Query: 388 aggagagcaactctgaaagaaggagcgcaagttctgttgaagcattggg 436
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aggagagcaactctgaaagaaggagcgcaagttctgttgaagcattggg 490
>gnl|LJGI|GO010457 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 747
Score = 174 bits (88), Expect = 3e-43
Identities = 172/196 (87%), Gaps = 3/196 (1%)
Strand = Plus / Plus
Query: 61 aagagaatgggggaaatggacactggaccattcctcgaagccatgaagaaaagatataat 120
|||||||||||||| || |||||| |||| ||||| ||||| |||||| |||||||||||
Sbjct: 501 aagagaatgggggagattgacactagacccttccttgaagcaatgaaggaaagatataat 560
Query: 121 gaagaggaagctgaagagagagcttcagaactatgttcattgtgggcagaatatctgaag 180
|| || ||||||| || ||||||||||||||| ||||| |||||||||| ||||||||
Sbjct: 561 gaggaagaagctgcagtgagagcttcagaactgagttcaatgtgggcagattatctgaa- 619
Query: 181 gacccagattggcatccattcaaagttgtcataattgaagggaaagaaaaggagattatt 240
||| | |||||||||||||||||||||||| |||||||||| ||||||| |||||||||
Sbjct: 620 gacaccaattggcatccattcaaagttgtcacaattgaaggg-aagaaaa-gagattatt 677
Query: 241 aaagatgacgatgaaa 256
| |||||||||||||
Sbjct: 678 gatgatgacgatgaaa 693
>gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 1275
Score = 167 bits (84), Expect = 8e-41
Identities = 285/352 (80%)
Strand = Plus / Plus
Query: 61 aagagaatgggggaaatggacactggaccattcctcgaagccatgaagaaaagatataat 120
||||||||||| ||| | |||||| |||| ||| | ||||| ||||||| | |||||||
Sbjct: 695 aagagaatgggtgaacttgacactagaccgttcgtagaagctatgaagatgaaatataat 754
Query: 121 gaagaggaagctgaagagagagcttcagaactatgttcattgtgggcagaatatctgaag 180
|| | || || ||||| || || |||||||| |||||||| |||| ||| |||||||||
Sbjct: 755 gaggcagacgcagaagatagggcatcagaactgtgttcattatgggaagagtatctgaag 814
Query: 181 gacccagattggcatccattcaaagttgtcataattgaagggaaagaaaaggagattatt 240
|| || || ||||||||||| ||| || ||| |||||||||||| | |||| || |||
Sbjct: 815 gatcctgactggcatccatttaaaatttccatgattgaagggaaacatcaggaaatcatt 874
Query: 241 aaagatgacgatgaaaagttgaatgggctaaaaaatgacatcggtgaaggggcgtataaa 300
| ||||| ||||||||||||| || || ||||| || || || ||||| | || ||
Sbjct: 875 gatgatgaagatgaaaagttgagaggactgaaaaacgaaatgggcgaaggagtctacgaa 934
Query: 301 gcagtggtgactgctttaacagagataaacgaatacaatcccagtgggcgatacataacc 360
|| || ||||| ||||| | ||||||||| ||||| ||||| || ||||| || ||||||
Sbjct: 935 gcggttgtgacagctttgagagagataaatgaatataatccaagcgggcggtatataacc 994
Query: 361 tcagaattatggaactatgaagagggaaggagagcaactctgaaagaaggag 412
|||||||||||||| ||| |||||||||||||||||||| |||||||||||
Sbjct: 995 tcagaattatggaattataaagagggaaggagagcaacttcgaaagaaggag 1046