Miyakogusa Predicted Gene
- Lj0g3v0241289.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0241289.1 Non Chatacterized Hit- tr|K4C2C0|K4C2C0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,45,3e-17,seg,NULL; coiled-coil,NULL; XS,XS domain; zf-XS,Zinc
finger-XS domain; TRANSCRIPTION FACTOR X1-LIKE,,CUFF.15798.1
(1308 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78612 similar to UniRef100_A7PIT9 Cluster: Chromosome... 2397 0.0
gnl|LJGI|BW596862 weakly similar to UniRef100_A7NYZ4 Cluster: Ch... 280 2e-74
gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 151 1e-35
gnl|LJGI|TC61574 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 100 4e-20
gnl|LJGI|FS320616 weakly similar to UniRef100_A7PIT9 Cluster: Ch... 72 1e-11
>gnl|LJGI|TC78612 similar to UniRef100_A7PIT9 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 1863
Score = 2397 bits (1209), Expect = 0.0
Identities = 1280/1310 (97%), Gaps = 2/1310 (0%)
Strand = Plus / Plus
Query: 1 atggctcacagctctgacgaggattctgatataagtgaatcagaaataagcgagtacgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 atggctcacagctctgacgaggattctgatataagtgaatcagaaataagcgagtacgaa 248
Query: 61 gataaatattatgaagaactgaaaaatggaagtcagaatgtgaaaacctcagatgagacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gataaatattatgaagaactgaaaaatggaagtcagaatgtgaaaacctcagatgagacc 308
Query: 121 ttcacttgtccatactgccctnnnnnnnggaaacgggattatttatacaatgaactcctt 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 309 ttcacttgtccatactgccctaaaaaaaggaaacgggattatttatacaatgaactcctt 368
Query: 181 caacatgcttctggggtgggtcagagtggttcacaaaagagaaaggcaaaagaaaaggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 caacatgcttctggggtgggtcagagtggttcacaaaagagaaaggcaaaagaaaaggct 428
Query: 241 aatcatttggccttagtgaaatatttggaaaaggatctaaagaatggaacgaatggtgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aatcatttggccttagtgaaatatttggaaaaggatctaaagaatggaacgaatggtgat 488
Query: 301 gttccatcaaaacccgctgataaaaatgattctcaggttaattctgatgagcagtttgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gttccatcaaaacccgctgataaaaatgattctcaggttaattctgatgagcagtttgtg 548
Query: 361 tggccctggattgggattgtagttaatattcccactagacggacagaagacgggcgcact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tggccctggattgggattgtagttaatattcccactagacggacagaagacgggcgcact 608
Query: 421 gttggggcgagtggttccaagctgagggatgagtacaaaagcaggggtttcaatcctgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gttggggcgagtggttccaagctgagggatgagtacaaaagcaggggtttcaatcctgtt 668
Query: 481 cgagtcaatcctttgtggaatttccgaggtcacactggaactgctcttgtggaattcaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cgagtcaatcctttgtggaatttccgaggtcacactggaactgctcttgtggaattcaaa 728
Query: 541 aaagactggccaggcttagataatgcgttagcctttgaaagagcatatgaattagaacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 aaagactggccaggcttagataatgcgttagcctttgaaagagcatatgaattagaacat 788
Query: 601 catgggaaaaaggattggtttgctaattctgaaccgaaggctggtctatatgcctgggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 catgggaaaaaggattggtttgctaattctgaaccgaaggctggtctatatgcctgggtt 848
Query: 661 gcccgagcagatgactacaacaaaatgaacgtcattggggaacatctgcggaagatggct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 gcccgagcagatgactacaacaaaatgaacgtcattggggaacatctgcggaagatggct 908
Query: 721 gatgtcaaaaccatacctgaactcattgaagaagaagctcgaaggcagaatagtctagtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 gatgtcaaaaccatacctgaactcattgaagaagaagctcgaaggcagaatagtctagtg 968
Query: 781 tccaatttgactaacattatacaggtgaaaaacaagcacttaaaagagatggaactaaga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 tccaatttgactaacattatacaggtgaaaaacaagcacttaaaagagatggaactaaga 1028
Query: 841 tgctctgagactacggtcaaaatggagattgccatatcagaaaaagataagctcattcaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 tgctctgagactacggtcaaaatggagattgccatatcagaaaaagataagctcattcaa 1088
Query: 901 gattataatgaagagataaagaaaatacagtcaagtgctagggatcacttccaaagaatt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 gattataatgaagagataaagaaaatacagtcaagtgctagggatcacttccaaagaatt 1148
Query: 961 tttaacgatcatgagaagcttaaattgcaactggaatctcagaaaagcgtgcttgagttg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 tttaacgatcatgagaagcttaaattgcaactggaatctcagaaaagcgtgcttgagttg 1208
Query: 1021 cgaaaaattgaattggaaaagcgcgaggcacataatgaaagtgaaagaaaaaagctggca 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 cgaaaaattgaattggaaaagcgcgaggcacataatgaaagtgaaagaaaaaagctggca 1268
Query: 1081 gaagatattgaggagaacgcagtgaagaataactctcttcagatggcttctctggagcaa 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 gaagatattgaggagaacgcagtgaagaataactctcttcagatggcttctctggagcaa 1328
Query: 1141 cagaaatcggatgaaaatgttatgaaactggctgaagatcnnnnnnnnnnnnnnnnnnnn 1200
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1329 cagaaatcggatgaaaatgttatgaaactggctgaagatcaaaagagagaaaaagaaaaa 1388
Query: 1201 ctccatgctaaaatcattcaacttca-aaaagaactggatatgaaacaaaagctggaa-t 1258
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |
Sbjct: 1389 ctccatgctaaaatcattcaacttcagaaaagaactggatatgaaaccaaagctggaatt 1448
Query: 1259 tggagattcaacagctaaaaggatcattaagtgttctgaagcacatagaa 1308
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1449 tggagattcaacagctaaaaggatcattaagtgttctgaagcacatagaa 1498
>gnl|LJGI|BW596862 weakly similar to UniRef100_A7NYZ4 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 490
Score = 280 bits (141), Expect = 2e-74
Identities = 141/141 (100%)
Strand = Plus / Plus
Query: 1 atggctcacagctctgacgaggattctgatataagtgaatcagaaataagcgagtacgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atggctcacagctctgacgaggattctgatataagtgaatcagaaataagcgagtacgaa 242
Query: 61 gataaatattatgaagaactgaaaaatggaagtcagaatgtgaaaacctcagatgagacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gataaatattatgaagaactgaaaaatggaagtcagaatgtgaaaacctcagatgagacc 302
Query: 121 ttcacttgtccatactgccct 141
|||||||||||||||||||||
Sbjct: 303 ttcacttgtccatactgccct 323
>gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 1275
Score = 151 bits (76), Expect = 1e-35
Identities = 266/336 (79%)
Strand = Plus / Plus
Query: 969 tcatgagaagcttaaattgcaactggaatctcagaaaagcgtgcttgagttgcgaaaaat 1028
|||||| | |||||| ||||||||||||| ||||||||| | |||||||| |||| |||
Sbjct: 151 tcatgaaaggcttaagttgcaactggaatatcagaaaagagaacttgagtttcgaagaat 210
Query: 1029 tgaattggaaaagcgcgaggcacataatgaaagtgaaagaaaaaagctggcagaagatat 1088
||| || |||| || ||| |||||||||||||||||||||||||| ||| |||||||||
Sbjct: 211 cgaactgcaaaaacgtgagacacataatgaaagtgaaagaaaaaagttggaagaagatat 270
Query: 1089 tgaggagaacgcagtgaagaataactctcttcagatggcttctctggagcaacagaaatc 1148
| ||||| ||| ||| |||| ||||||| | |||||| ||||| |||||||||| |
Sbjct: 271 tatggagactgcaatgagaaatagctctcttgatatggctgttctggtgcaacagaaagc 330
Query: 1149 ggatgaaaatgttatgaaactggctgaagatcnnnnnnnnnnnnnnnnnnnnctccatgc 1208
| |||||||||| | |||||||||| ||||| |||||||
Sbjct: 331 cggtgaaaatgttttaaaactggctgcagatcaaaagcggcaaaaagaacaattccatgc 390
Query: 1209 taaaatcattcaacttcaaaaagaactggatatgaaacaaaagctggaattggagattca 1268
||||||||| || ||| ||||| |||||| | |||||||||| || ||||||||||||||
Sbjct: 391 taaaatcatccagcttgaaaaacaactggttgtgaaacaaaaacttgaattggagattca 450
Query: 1269 acagctaaaaggatcattaagtgttctgaagcacat 1304
||||||||||||| ||||| ||| ||||||||||
Sbjct: 451 acagctaaaaggaaaattaaatgtcatgaagcacat 486
>gnl|LJGI|TC61574 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (30%)
Length = 941
Score = 99.6 bits (50), Expect = 4e-20
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 1259 tggagattcaacagctaaaaggatcattaagtgttctgaagcacatagaa 1308
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tggagattcaacagctaaaaggatcattaagtgttctgaagcacatagaa 54
>gnl|LJGI|FS320616 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 719
Score = 71.9 bits (36), Expect = 1e-11
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 172 gaactccttcaacatgcttctggggtgggtcagagtggttcacaaaagagaaaggcaaaa 231
||||||||| | ||||||||||||||||||| |||| ||||| | ||||||| || ||
Sbjct: 367 gaactccttaatcatgcttctggggtgggtcggagtagttcagacaagagaagtgctgaa 426
Query: 232 gaaaaggctaatcatttggccttagtgaaatatttggaaaagga 275
|| |||| ||||||| | || |||||||||||| |||| |||||
Sbjct: 427 gagaagggtaatcatctagctttagtgaaatatatggagaagga 470