Miyakogusa Predicted Gene
- Lj0g3v0240199.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0240199.1 tr|Q7XX30|Q7XX30_ORYSJ OSJNBa0060B20.17 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0060B20.17 ,59.38,1.7,
,39150_g.1
(232 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64055 similar to UniRef100_A7Q3D7 Cluster: Chromosome... 452 e-127
gnl|LJGI|AV422441 similar to UniRef100_A7Q3D7 Cluster: Chromosom... 98 3e-20
gnl|LJGI|TC68913 similar to UniRef100_A7Q3D7 Cluster: Chromosome... 54 4e-07
>gnl|LJGI|TC64055 similar to UniRef100_A7Q3D7 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 841
Score = 452 bits (228), Expect = e-127
Identities = 231/232 (99%)
Strand = Plus / Minus
Query: 1 atgacatcatcatcaatagaaaagacagcatctgtctccaaatcctttacttctttaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 atgacatcatcatcaatagaaaagacagcatctgtctccaaatcctttacttctttaaac 612
Query: 61 ctattgttcaaactgtcttccatgttgatgtcaaattttaatttgacatgtcgcccatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctattgttcaaactgtcttccatgttgatgtcaaattttaatttgacatgtcgcccatct 552
Query: 121 gttgactcagactctattgcatggtttagaaatttaataagaaaatcagaaggagggtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gttgactcagactctattgcatggtttagaaatttaataagaaaatcagaaggagggtca 492
Query: 181 ggttcgctccacactatatgtactgattcaagtcgcggacatgatgaataat 232
||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 491 ggttcgctccacactatatgtgctgattcaagtcgcggacatgatgaataat 440
>gnl|LJGI|AV422441 similar to UniRef100_A7Q3D7 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 480
Score = 97.6 bits (49), Expect = 3e-20
Identities = 49/49 (100%)
Strand = Plus / Minus
Query: 184 tcgctccacactatatgtactgattcaagtcgcggacatgatgaataat 232
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tcgctccacactatatgtactgattcaagtcgcggacatgatgaataat 432
>gnl|LJGI|TC68913 similar to UniRef100_A7Q3D7 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 755
Score = 54.0 bits (27), Expect = 4e-07
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 148 agaaatttaataagaaaatcagaaggagggtcaggttcgctccacactatatgtactgat 207
|||||||| | |||| ||| |||||||| || || || |||||||| |||||||| |||
Sbjct: 737 agaaattttaaaagagcatctgaaggaggatcgggctcactccacacaatatgtaccgat 678
Query: 208 tcaagtcgcggacatgatgaata 230
||||| || || |||||||||||
Sbjct: 677 tcaagacgagggcatgatgaata 655