Miyakogusa Predicted Gene

Lj0g3v0239969.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0239969.1 tr|G7JSB4|G7JSB4_MEDTR NBS-containing
resistance-like protein OS=Medicago truncatula
GN=MTR_4g020550,39.51,4e-18,DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR
CLASS), PUTATIVE,NULL; LEUCINE-RICH REPEAT-CONTAINING
PROTEI,NODE_8505_length_412_cov_8.815534.path4.1
         (468 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61438 weakly similar to UniRef100_A2Q6G5 Cluster: TIR...   153   1e-36
gnl|LJGI|FS326053 weakly similar to UniRef100_A2Q6G5 Cluster: TI...   139   2e-32
gnl|LJGI|FS323379 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ...    52   3e-06

>gnl|LJGI|TC61438 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago
           truncatula|Rep: TIR - Medicago truncatula (Barrel
           medic), partial (33%)
          Length = 751

 Score =  153 bits (77), Expect = 1e-36
 Identities = 101/109 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgtcacagaaccataggccaggtggttttgccggtgttctacgatgtaaatccc 60
           ||||||||||||||||||||||||||||||||| |||||||||||||||  ||  |||||
Sbjct: 630 atggactgtcacagaaccataggccaggtggttctgccggtgttctacggcgtcgatccc 689

                                                            
Query: 61  tctgaagtgcggcaccaaactggtgagtttgggaaaaaatttcacaatc 109
           ||||||||||||| |||||| |||||||||||||| |||||||||||||
Sbjct: 690 tctgaagtgcggcgccaaaccggtgagtttgggaagaaatttcacaatc 738


>gnl|LJGI|FS326053 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago
           truncatula|Rep: TIR - Medicago truncatula (Barrel
           medic), partial (31%)
          Length = 695

 Score =  139 bits (70), Expect = 2e-32
 Identities = 94/102 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgtcacagaaccataggccaggtggttttgccggtgttctacgatgtaaatccc 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||| |||  |||||
Sbjct: 564 atggactgtcacagaaccataggccaggtggttctgccggtgttctacggtgtcgatccc 623

                                                     
Query: 61  tctgaagtgcggcaccaaactggtgagtttgggaaaaaattt 102
           ||||||||||||| |||||||||||| ||||| || ||||||
Sbjct: 624 tctgaagtgcggcgccaaactggtgaatttggaaacaaattt 665


>gnl|LJGI|FS323379 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
           truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
           (Barrel medic), partial (10%)
          Length = 728

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                       
Query: 15  aaccataggccaggtggttttgccggtgttctacgatgtaaatccctctgaagtgcggca 74
           ||||| ||||| ||||||| | ||||||||||| || ||| ||||||| || ||||| ||
Sbjct: 485 aaccacaggcctggtggttgttccggtgttctatgaggtagatccctcagatgtgcgtca 544

                             
Query: 75  ccaaactggtgagtttgg 92
            || || |||||||||||
Sbjct: 545 tcagacaggtgagtttgg 562