Miyakogusa Predicted Gene

Lj0g3v0239829.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0239829.1 Non Chatacterized Hit- tr|C5XY05|C5XY05_SORBI
Putative uncharacterized protein Sb04g007380 OS=Sorghu,41.44,3e-19,no
description,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; ABC
TRANSPORTER,NULL,NODE_52073_length_418_cov_65.677032.path3.1
         (444 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CB826794 similar to UniRef100_A7QI68 Cluster: Chromosom...   357   4e-98
gnl|LJGI|BW630248 similar to UniRef100_A7QI68 Cluster: Chromosom...   280   7e-75

>gnl|LJGI|CB826794 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_101, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 619

 Score =  357 bits (180), Expect = 4e-98
 Identities = 190/192 (98%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 agagggagaaggtggagcaactgatacttgaaccaactactaatcatgcaatagtatgtg 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agagggagaaggtggagcaactgatacttgaaccaactactaatcatgcaatagtatgtg 342

                                                                       
Query: 314 acaacctaagaaaggtctatccggcgagggatggtaacccagcaaaatttgcagtgagag 373
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 acaacctaagaaaggtctatccggcgagggatggtaacccagcaaaatttgcagtgagag 402

                                                                       
Query: 374 gattgtcccttgctctgcctcaaggggagt-gctttgggatgcttggtcccaatggtgct 432
           |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 403 gattgtcccttgctctgcctcaaggggactcgctttgggatgcttggtcccaatggtgct 462

                       
Query: 433 gggaagacttct 444
           ||||||||||||
Sbjct: 463 gggaagacttct 474


>gnl|LJGI|BW630248 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_101, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 480

 Score =  280 bits (141), Expect = 7e-75
 Identities = 197/218 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcggtggggagatttgagtgatagcacaaatggcatgaaagaggtctttattatcata 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 263 atgcggtggggagatttgagtgatagtacaaatggcatgaaagaggtctttattatcata 322

                                                                       
Query: 61  ttcatggagtggattttggctcttatgttcgcttattatatggatcaagttttgacatca 120
           ||| |||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 323 ttcgtggagtggcttttggctcttattttcgcttattacatggatcaagttttgacatca 382

                                                                       
Query: 121 ggatgcggaaaaagccatcnnnnnnncatgaaagaatttcagaaaaatcgtagctcatct 180
           ||| | |||||||||| ||       | |||||| |||||||||||||||||||||||||
Sbjct: 383 ggaagtggaaaaagccctctttttttcttgaaaggatttcagaaaaatcgtagctcatct 442

                                                 
Query: 181 tttcagaagcttagtttccaaaggcaggactctaaagt 218
           |||| |||||||||  ||||||||||||| ||||||||
Sbjct: 443 tttcggaagcttagcctccaaaggcaggagtctaaagt 480