Miyakogusa Predicted Gene
- Lj0g3v0239369.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0239369.1 Non Chatacterized Hit- tr|I1KXM3|I1KXM3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50936 PE,73.65,0,no
description,Paired amphipathic helix; coiled-coil,NULL; seg,NULL;
PAH,Paired amphipathic helix; S,CUFF.15710.1
(3147 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC599945 similar to UniRef100_A7Q2L0 Cluster: Chromosom... 575 e-163
gnl|LJGI|TC82605 similar to UniRef100_A7Q2L0 Cluster: Chromosome... 220 4e-56
gnl|LJGI|AV415593 similar to UniRef100_Q0JRB9 Cluster: Os01g0109... 76 1e-12
>gnl|LJGI|DC599945 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 556
Score = 575 bits (290), Expect = e-163
Identities = 290/290 (100%)
Strand = Plus / Plus
Query: 1 atgaagaggtccagagatgatgtgtactcacaacccaaacggcccatagtgtcctctaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atgaagaggtccagagatgatgtgtactcacaacccaaacggcccatagtgtcctctaga 326
Query: 61 ggagaaccctcgggacaaccccagatgatgagtggtggtcagaaactgaccacaaatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggagaaccctcgggacaaccccagatgatgagtggtggtcagaaactgaccacaaatgat 386
Query: 121 gccttagcatatctcaaggcagtaaaggaaatgtttcaagataatagggaaaagtatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gccttagcatatctcaaggcagtaaaggaaatgtttcaagataatagggaaaagtatgat 446
Query: 181 gactttttggaagttatgaaggatttcaaggctcaaagaattgatacaacaggtgtcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gactttttggaagttatgaaggatttcaaggctcaaagaattgatacaacaggtgtcata 506
Query: 241 gcaagagtgaaggatctctttaaagggcataaagatctaattttgggatt 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gcaagagtgaaggatctctttaaagggcataaagatctaattttgggatt 556
>gnl|LJGI|TC82605 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 932
Score = 220 bits (111), Expect = 4e-56
Identities = 285/343 (83%)
Strand = Plus / Plus
Query: 2629 gtcaataaacaagatcattccattgaacggttgatgaatgctaatgtctcactgtcctct 2688
|||||||| ||| | || |||| ||| ||||| |||||||||||||||||| | |||
Sbjct: 514 gtcaataagcaaaaccagtccagtgagcggttagtgaatgctaatgtctcaccagcatct 573
Query: 2689 ggagtggagcaaagtaatggaagaacatatgtggataatgcatcaggacttacagcaact 2748
||| ||||||||||||||||||| ||| | | |||||| ||||||||| || || |||
Sbjct: 574 ggaatggagcaaagtaatggaaggacaaaaatagataatacatcaggacacactgctact 633
Query: 2749 ccatctagacctggtaatatttctggcgagggaggacatgaattaccgtcatcagagggg 2808
|||||| || |||||||| ||||| ||||||||||| ||||||||| |||||||||||
Sbjct: 634 ccatctggaaatggtaatacttctgtcgagggaggacttgaattaccttcatcagagggt 693
Query: 2809 gttgattctacaagaccagttacatctacaattggggccatcatcgaagacaccaaaggt 2868
| |||||| |||||||||| ||||| |||| |||||||| || | || |||| ||| |
Sbjct: 694 ggtgattccacaagaccaggtacattcacaaatggggccaccactggaggcaccgaagtt 753
Query: 2869 cacaggtataatgaagaatcagttagacacttgaaaagtgaaagagaagagggtgaatta 2928
||||| || | || ||||| || ||||||| |||||||||||||||||||| || |||
Sbjct: 754 cacagataccaagagcaatcaattcgacacttcaaaagtgaaagagaagagggcgagtta 813
Query: 2929 tctccaaatggagactttgaagaggataacttggcagtttatg 2971
||||||||||||||| | |||||||||||||| ||||||||||
Sbjct: 814 tctccaaatggagacatggaagaggataactttgcagtttatg 856
Score = 176 bits (89), Expect = 5e-43
Identities = 158/181 (87%)
Strand = Plus / Plus
Query: 2158 gatccagagattcatcaagatttgtatcagctcataaaatattcatgtggagaaatttgt 2217
|||| ||| |||||| ||||||||||||||||| |||||||||||||||| ||| ||||
Sbjct: 18 gatctagacattcatgaagatttgtatcagctcgtaaaatattcatgtggggaactttgc 77
Query: 2218 acaactgaacaattggaaaaagttatgaagatttggacaacatttttagaattcatgctt 2277
||| ||||||| ||||| |||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 78 acagctgaacagttggataaagttatgaaggtttggacaacttttttagaacccatgctc 137
Query: 2278 ggcgttccttctcgaccccacggtcccgaggatacagaagatgttgtcaaggataaaaat 2337
| ||||||||||| |||| ||| ||||||||||||||||||||||||||| ||| |||
Sbjct: 138 tgtgttccttctcgggcccagggtgccgaggatacagaagatgttgtcaaggctaagaat 197
Query: 2338 a 2338
|
Sbjct: 198 a 198
>gnl|LJGI|AV415593 similar to UniRef100_Q0JRB9 Cluster: Os01g0109700 protein; n=3; Oryza
sativa Japonica Group|Rep: Os01g0109700 protein - Oryza
sativa subsp. japonica (Rice), partial (9%)
Length = 416
Score = 75.8 bits (38), Expect = 1e-12
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 3100 gaaagtcctcatagatcatcagatgacagtgaaaatgcttctgaaa 3145
||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 3 gaaagtcctcacaggtcatcagatgacagtgaaaatgcttctgaaa 48