Miyakogusa Predicted Gene

Lj0g3v0238949.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0238949.1 Non Chatacterized Hit- tr|G5A448|G5A448_PHYSP
Putative uncharacterized protein OS=Phytophthora sojae,23.45,2e-18,no
description,Armadillo-like helical; seg,NULL; ARM
repeat,Armadillo-type fold; SUBFAMILY NOT NAMED,CUFF.15695.1
         (1509 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS361548 similar to UniRef100_A7P540 Cluster: Chromosom...   297   1e-79

>gnl|LJGI|FS361548 similar to UniRef100_A7P540 Cluster: Chromosome chr4 scaffold_6,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_6, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (9%)
          Length = 556

 Score =  297 bits (150), Expect = 1e-79
 Identities = 243/274 (88%)
 Strand = Plus / Minus

                                                                        
Query: 1232 tcctccaaccacgcatatattcatctcctgcttctctggactgccttcgtgctctagctt 1291
            ||||||| | ||||||||||||| |||||||| || ||||||| |||||||||||||| |
Sbjct: 556  tcctccagcaacgcatatattcacctcctgctgctttggactgtcttcgtgctctagcat 497

                                                                        
Query: 1292 gtcgtgtcctgcttggattagccagagatgatactattgcacacatattgacaaagcttc 1351
            |||| ||||||||||| ||||| |||||||||| ||| |||||||||||||||||||| |
Sbjct: 496  gtcgagtcctgcttggtttagcaagagatgatattatagcacacatattgacaaagctac 437

                                                                        
Query: 1352 aggttgggaaaaagctgtcagaactaattcgggattcaggcagcccgacacttggaaatg 1411
            |||||||||| |||||||||||||||||| ||||||||||||| | ||||| |||||  |
Sbjct: 436  aggttgggaagaagctgtcagaactaattagggattcaggcagtcagacacatggaacag 377

                                                                        
Query: 1412 agcagggtaggtggcaagctgaactttcccaggctgcaattgagctaattgggattgtga 1471
            ||||||||||||||||||||||||||||||| |||||||| ||| |||||||| |||| |
Sbjct: 376  agcagggtaggtggcaagctgaactttcccaagctgcaatcgagttaattggggttgtca 317

                                              
Query: 1472 ctaatttagggtgtgcaagtacattagctgctac 1505
            | || | ||||  |||||||||||| ||||||||
Sbjct: 316  ccaactcagggcatgcaagtacattggctgctac 283