Miyakogusa Predicted Gene

Lj0g3v0238379.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0238379.1 Non Chatacterized Hit- tr|E1Z6W4|E1Z6W4_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,39.81,0.0000000000004,Tocopherol_cycl,Tocopherol
cyclase,CUFF.15628.1
         (345 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81420 similar to UniRef100_Q7XAF0 Cluster: Tocopherol...   622   e-178

>gnl|LJGI|TC81420 similar to UniRef100_Q7XAF0 Cluster: Tocopherol cyclase; n=1;
           Eucalyptus gunnii|Rep: Tocopherol cyclase - Eucalyptus
           gunnii (Cider tree), partial (32%)
          Length = 764

 Score =  622 bits (314), Expect = e-178
 Identities = 336/342 (98%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtattcggtggagaatcctgcgtttcccaacccattgacgcctttggaattggttcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 371 atgtattcggtggagaatcctgcgtttcccaacccattgacgcctttggaatcagttcaa 430

                                                                       
Query: 61  tatggacctaggtttactggtgttggggctcagattcttggtgctgatgataactacatt 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 431 tatggacctaggtttactggtgttggggttcagattcttggtgctgatgataactacatt 490

                                                                       
Query: 121 tgccaatacactccacaatcaaacaacttctgggggagtaggcatgaactcgtattgggg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 491 tgccaatacactccacaatcaaacaacttctgggggagtaggcatgaactcttattgggg 550

                                                                       
Query: 181 aacactttcgtggcgaaaccaaattcaaaacctccaaacaaggaggttcctcctcaggaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aacactttcgtggcgaaaccaaattcaaaacctccaaacaaggaggttcctcctcaggaa 610

                                                                       
Query: 241 tttaataatagagtgctggaaggttttcaagtcactaccctttggaatcaaggtttcatt 300
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 611 tttaataatagagtgctggaaggttttcaagtcactcccctttggaatcaaggtttcatt 670

                                                     
Query: 301 tgcgatgatggaaggtcaaattatgtagaaacagtaaagacg 342
           ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 671 tgcgatgatggaa-gtcaaattatgtagaaacagtaaagacg 711