Miyakogusa Predicted Gene
- Lj0g3v0238209.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0238209.1 tr|B6TTK7|B6TTK7_MAIZE Actin associated protein
OS=Zea mays PE=2 SV=1,39.87,3e-18,seg,NULL,CUFF.15615.1
(369 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75304 similar to UniRef100_O64621 Cluster: Expressed ... 692 0.0
gnl|LJGI|TC72016 similar to UniRef100_O64621 Cluster: Expressed ... 654 0.0
gnl|LJGI|BW596844 similar to UniRef100_O64621 Cluster: Expressed... 250 5e-66
gnl|LJGI|GO009330 UniRef100_A0AUW9 Cluster: Protein tyrosine pho... 58 4e-08
>gnl|LJGI|TC75304 similar to UniRef100_O64621 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (81%)
Length = 580
Score = 692 bits (349), Expect = 0.0
Identities = 349/349 (100%)
Strand = Plus / Plus
Query: 1 atggccgtcaacagcgaatccacgccgccaccggtgatcggtaaaatcgggccttacact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atggccgtcaacagcgaatccacgccgccaccggtgatcggtaaaatcgggccttacact 144
Query: 61 gttttcatgacaccgccttctaccccaaaaccctcttcccctgacccagttccagttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gttttcatgacaccgccttctaccccaaaaccctcttcccctgacccagttccagttcat 204
Query: 121 tcccctcagaaacccccgaccaagatcctccctcctccgcctcagattcaggttccttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tcccctcagaaacccccgaccaagatcctccctcctccgcctcagattcaggttccttcc 264
Query: 181 tccgccaaatccttctccgatggctccgtttccggcttcttcaggaacgctgttaccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccgccaaatccttctccgatggctccgtttccggcttcttcaggaacgctgttaccaag 324
Query: 241 gttcacaatgctcactcaagtttggatgatcatttggcgcgttggttcgggttgaatcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttcacaatgctcactcaagtttggatgatcatttggcgcgttggttcgggttgaatcag 384
Query: 301 tctaagtatcaatgggctcttgatgattattatgagagcaagggaatgg 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctaagtatcaatgggctcttgatgattattatgagagcaagggaatgg 433
>gnl|LJGI|TC72016 similar to UniRef100_O64621 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (75%)
Length = 889
Score = 654 bits (330), Expect = 0.0
Identities = 346/350 (98%), Gaps = 1/350 (0%)
Strand = Plus / Plus
Query: 1 atggccgtcaacagcgaatccacgccgccaccggtgatcggtaaaatcgggccttacact 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atggccgtcaacagcgaattcacgccgccaccggtgatcggtaaaatcgggccttacact 173
Query: 61 gttttcatgacaccgccttctaccccaaaaccctcttcccctgacccagttccagttcat 120
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 174 gttttcatgactccgccttctaccccaaaaccctcttcccctgacccatttccagttcat 233
Query: 121 tcccctcagaaacccccgaccaagatcctccctcctccgcctcagattcag-gttccttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 234 tcccctcagaaacccccgaccaagatcctccctcctccgcctcagattcagcgttccttc 293
Query: 180 ctccgccaaatccttctccgatggctccgtttccggcttcttcaggaacgctgttaccaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ctccgccaaatccttctccgatggctccgtttccggcttcttcaggaacgctgttaccaa 353
Query: 240 ggttcacaatgctcactcaagtttggatgatcatttggcgcgttggttcgggttgaatca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ggttcacaatgctcactcaagtttggatgatcatttggcgcgttggttcgggttgaatca 413
Query: 300 gtctaagtatcaatgggctcttgatgattattatgagagcaagggaatgg 349
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gtctaagtatcaatgggctcttgatgattattatgagagcaagggaatgg 463
>gnl|LJGI|BW596844 similar to UniRef100_O64621 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (44%)
Length = 452
Score = 250 bits (126), Expect = 5e-66
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 224 ggaacgctgttaccaaggttcacaatgctcactcaagtttggatgatcatttggcgcgtt 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ggaacgctgttaccaaggttcacaatgctcactcaagtttggatgatcatttggcgcgtt 237
Query: 284 ggttcgggttgaatcagtctaagtatcaatgggctcttgatgattattatgagagcaagg 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ggttcgggttgaatcagtctaagtatcaatgggctcttgatgattattatgagagcaagg 297
Query: 344 gaatgg 349
||||||
Sbjct: 298 gaatgg 303
>gnl|LJGI|GO009330 UniRef100_A0AUW9 Cluster: Protein tyrosine phosphatase
non-receptor type 3; n=1; Homo sapiens|Rep: Protein
tyrosine, partial (1%)
Length = 743
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 252 tcactcaagtttggatgatcatttggcgcgttggttcgggttgaatcag 300
||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 115 tcactcaagtttggatgatgatttgatacgttggtttgggttgaatcag 163