Miyakogusa Predicted Gene
- Lj0g3v0238129.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0238129.1 Non Chatacterized Hit- tr|I3S957|I3S957_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,36.26,1e-18,A
Receptor for Ubiquitination Targets,F-box domain, cyclin-like;
FBOX,F-box domain, cyclin-like; no ,gene.g18626.t1.1
(1116 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68340 similar to UniRef100_Q9LKL6 Cluster: DEAD box p... 131 1e-29
gnl|LJGI|DC594943 similar to UniRef100_A7QK60 Cluster: Chromosom... 98 1e-19
gnl|LJGI|TC76992 similar to UniRef100_A0KCX4 Cluster: Binding-pr... 88 1e-16
gnl|LJGI|TC77884 76 5e-13
>gnl|LJGI|TC68340 similar to UniRef100_Q9LKL6 Cluster: DEAD box protein P68; n=1; Pisum
sativum|Rep: DEAD box protein P68 - Pisum sativum (Garden
pea), partial (32%)
Length = 1136
Score = 131 bits (66), Expect = 1e-29
Identities = 93/102 (91%)
Strand = Plus / Plus
Query: 972 gaaagcaatagctgatgctgaatatgaaattaatatagcatttgcaactgaaaaggttgc 1031
||||||||||||||||||||||| || || || | | ||||||||||||| |||||||||
Sbjct: 415 gaaagcaatagctgatgctgaatctggaaatactgtggcatttgcaactggaaaggttgc 474
Query: 1032 tagaagaaaggagaaagaagcagaagctgcacaaaaagaggc 1073
||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 475 tagaagaaaggagaaagaagcagcagctgcacaaagagaggc 516
>gnl|LJGI|DC594943 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 141
Score = 97.6 bits (49), Expect = 1e-19
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 48 gatagaagatcggatcagtgccttaccggacgaaatcctcagctacatcctctcattttt 107
||||||||||| | |||| |||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 32 gatagaagatctgctcagcgccttaccggaccaaatcctccgctacatcctctcatttct 91
Query: 108 tccaaccaaatttgcattcaccacc 132
||||||||||| |||||||||||
Sbjct: 92 gccaaccaaattcccattcaccacc 116
>gnl|LJGI|TC76992 similar to UniRef100_A0KCX4 Cluster: Binding-protein-dependent
transport systems inner membrane component; n=2;
Burkholderia cenocepacia|Rep: Binding-protein-dependent
transport systems inner membrane component -
Burkholderia cenocepacia (strain HI2424), partial (5%)
Length = 1195
Score = 87.7 bits (44), Expect = 1e-16
Identities = 114/136 (83%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 772 tcctaccacagagcaatgcccgtgtttcaaaacttaatcagccttgagctaagcttttat 831
|||||| |||||| |||||||| |||| ||| ||||||| |||| |||||| |||| |
Sbjct: 525 tcctactacagagaaatgcccgc-tttcgaaatttaatcaaccttaagctaacctttgtt 583
Query: 832 ctctttcctagctgggttgaggtggtggaagtgctcccttattgtcccaagcttcaatct 891
||| ||| ||||||||| || |||||| ||||||||||||||||||||||||| ||
Sbjct: 584 tgcttccctggctgggttggtgtaatggaagcgctcccttattgtcccaagcttcaaact 643
Query: 892 cttgccattgataagg 907
||||||||||| ||||
Sbjct: 644 cttgccattgaaaagg 659
>gnl|LJGI|TC77884
Length = 548
Score = 75.8 bits (38), Expect = 5e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 857 tggaagtgctcccttattgtcccaagcttcaatctcttgccattga 902
|||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 16 tggaagtgctcccttattgtcccaagcttcaaactcttgacattga 61