Miyakogusa Predicted Gene
- Lj0g3v0237099.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0237099.2 CUFF.15536.2
(393 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80993 268 2e-71
gnl|LJGI|TC79969 weakly similar to UniRef100_A7P2N0 Cluster: Chr... 268 2e-71
gnl|LJGI|TC81813 131 4e-30
gnl|LJGI|TC67841 similar to UniRef100_A7PIM6 Cluster: Chromosome... 98 5e-20
gnl|LJGI|BP065104 56 2e-07
gnl|LJGI|TC76756 homologue to UniRef100_A7NSS1 Cluster: Chromoso... 56 2e-07
gnl|LJGI|TC58721 similar to UniRef100_Q2HTD6 Cluster: RNA-bindin... 56 2e-07
>gnl|LJGI|TC80993
Length = 1176
Score = 268 bits (135), Expect = 2e-71
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 259 cagaagtacaagaagcagaagcacagatcatgtgagagggttcatcgtcagatgaacagg 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cagaagtacaagaagcagaagcacagatcatgtgagagggttcatcgtcagatgaacagg 259
Query: 319 gcgtggaaattgaaggctgaattggataacgataggagtgtgactctggagcttcagtcc 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcgtggaaattgaaggctgaattggataacgataggagtgtgactctggagcttcagtcc 319
Query: 379 tgctgttggtgaagc 393
|||||||||||||||
Sbjct: 320 tgctgttggtgaagc 334
Score = 135 bits (68), Expect = 2e-31
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 194 caggccctgtctctgtcgtggatgaatgcgaagtgggtacccatggtcttcgttcgtcat 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggccctgtctctgtcgtggatgaatgcgaagtgggtacccatggtcttcgttcgtcat 60
Query: 254 tctttcag 261
||||||||
Sbjct: 61 tctttcag 68
>gnl|LJGI|TC79969 weakly similar to UniRef100_A7P2N0 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 647
Score = 268 bits (135), Expect = 2e-71
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 259 cagaagtacaagaagcagaagcacagatcatgtgagagggttcatcgtcagatgaacagg 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 cagaagtacaagaagcagaagcacagatcatgtgagagggttcatcgtcagatgaacagg 143
Query: 319 gcgtggaaattgaaggctgaattggataacgataggagtgtgactctggagcttcagtcc 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gcgtggaaattgaaggctgaattggataacgataggagtgtgactctggagcttcagtcc 203
Query: 379 tgctgttggtgaagc 393
|||||||||||||||
Sbjct: 204 tgctgttggtgaagc 218
>gnl|LJGI|TC81813
Length = 572
Score = 131 bits (66), Expect = 4e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 316 agggcgtggaaattgaaggctgaattggataacgataggagtgtgactctggagcttcag 375
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 94 agggcgtggaaattgaaggctgaattggataaagataggagtgtgactatggagcttcag 153
Query: 376 tcctgctgttggtgaagc 393
|| |||||||||||||||
Sbjct: 154 tcttgctgttggtgaagc 171
>gnl|LJGI|TC67841 similar to UniRef100_A7PIM6 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (8%)
Length = 2159
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 41 tttatttgactctctctccattttcactctttaatcttggcccttcatctgtgagac 97
||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 13 tttatttgactctctctccattttcactcttaaatcctggcccttcatctgtgagac 69
>gnl|LJGI|BP065104
Length = 501
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 207 tgtcgtggatgaatgcgaagtgggtacc 234
||||||||||||||||||||||||||||
Sbjct: 247 tgtcgtggatgaatgcgaagtgggtacc 274
>gnl|LJGI|TC76756 homologue to UniRef100_A7NSS1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 792
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 207 tgtcgtggatgaatgcgaagtgggtacc 234
||||||||||||||||||||||||||||
Sbjct: 331 tgtcgtggatgaatgcgaagtgggtacc 358
>gnl|LJGI|TC58721 similar to UniRef100_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA
recognition motif); Calcium-binding EF- hand; n=1;
Medicago truncatula|Rep: RNA-binding region RNP-1 (RNA
recognition motif); Calcium-binding EF- hand - Medicago
truncatula (Barrel medic), partial (13%)
Length = 797
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 155 ttgaagaagtatgggatgaaggagaggagtgt 186
||||||||||||||||||||||||| ||||||
Sbjct: 68 ttgaagaagtatgggatgaaggagaagagtgt 99