Miyakogusa Predicted Gene
- Lj0g3v0236989.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0236989.1 Non Chatacterized Hit- tr|D8RN24|D8RN24_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,26.2,5e-18,TPR-like,NULL; PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR: pentatricopeptid,CUFF.15544.1
(1726 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024945 weakly similar to UniRef100_A7QMW3 Cluster: Ch... 954 0.0
gnl|LJGI|AV770033 weakly similar to UniRef100_A7QMW3 Cluster: Ch... 561 e-159
gnl|LJGI|AV410916 similar to UniRef100_A6ZRG2 Cluster: Cell wall... 507 e-143
gnl|LJGI|TC60053 similar to UniRef100_A7QMW3 Cluster: Chromosome... 345 6e-94
>gnl|LJGI|GO024945 weakly similar to UniRef100_A7QMW3 Cluster: Chromosome chr14
scaffold_128, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_128, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 700
Score = 954 bits (481), Expect = 0.0
Identities = 500/505 (99%), Gaps = 1/505 (0%)
Strand = Plus / Plus
Query: 605 ttgttacttatactattttgatagaagctaccattttgaagggtggtgttgatgatgtta 664
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 197 ttgttacttatactattttgatagaagctaccatcttgaagggtggtgttgatgatgtta 256
Query: 665 tgaagcttttggatgagatgatagagagtggtttacgacctgatatgttcatttttaatg 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgaagcttttggatgagatgatagagagtggtttacgacctgatatgttcatttttaatg 316
Query: 725 cagttgtcaggggtatgtgcagagaagggttagtggatcgtgcttttgagttcattagat 784
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cagttgtcgggggtatgtgcagagaagggttagtggatcgtgcttttgagttcattagat 376
Query: 785 acataagtgccaagggttatgctccggatgtgatatcttataacattctgttgcgagggc 844
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 377 acataagtgccaagggttatgctccggatgtgatatcttatagcattctgttgcgagggc 436
Query: 845 ttctgaatcaagggaaatgggaagatggagagaaattgatgtctgatatgctttcaaaag 904
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttctgaatcaaaggaaatgggaagatggagagaaattgatgtctgatatgctttcaaaag 496
Query: 905 gttgtgagccaaatgttgtgacttacagcattttgattagttcgttatgtcgtgatggca 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gttgtgagccaaatgttgtgacttacagcattttgattagttcgttatgtcgtgatggca 556
Query: 965 aagttgaggaggcggtgagtttgttgaaggttatgaaggaacaggggttgacccctgatg 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aagttgaggaggcggtgagtttgttgaaggttatgaaggaacaggggttgacccctgatg 616
Query: 1025 cttatagctatgatcctttgattgcggcattctgcaaagagagtagggtggatttggcga 1084
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 617 cttatagctatgatcctttgattgcggcattctgcaaagagagta-ggtggatttggcga 675
Query: 1085 tagagttcttggaaagcatgatctc 1109
|||||||||||||||||||||||||
Sbjct: 676 tagagttcttggaaagcatgatctc 700
Score = 155 bits (78), Expect = 1e-36
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 atgacaacagtttccaccaaattcctacctcacacactccccttcacactccaacaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atgacaacagtttccaccaaattcctacctcacacactccccttcacactccaacaaacc 183
Query: 61 aaccccatttcccttgtt 78
||||||||||||||||||
Sbjct: 184 aaccccatttcccttgtt 201
>gnl|LJGI|AV770033 weakly similar to UniRef100_A7QMW3 Cluster: Chromosome chr14
scaffold_128, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_128, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 298
Score = 561 bits (283), Expect = e-159
Identities = 295/298 (98%), Gaps = 2/298 (0%)
Strand = Plus / Minus
Query: 1414 gacatggaaagtagtgtgtaccaaccttcagttattagttacaacattgttcttcttgga 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gacatggaaagtagtgtgtaccaaccttcagttattagttacaacattgttcttcttgga 239
Query: 1474 ttgagcaaagtgcacagaatctccgatgccattgaggtgttagctgcgatggttgacaaa 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ttgagcaaagtgcacagaatctccgatgccattgaggtgttagctgcgatggttgacaaa 179
Query: 1534 gggtgtcggccaaatgaaactacttacacattgttggttgaagggattggttatgctggc 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gggtgtcggccaaatgaaactacttacacattgttggttgaagggattggttatgctggc 119
Query: 1594 tggccagatgatgctatggagctagctatttcccttgttgatatggacgcgattcctcaa 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tggccagatgatgctatggagctagctatttcccttgttgatatggacgcgattcctcaa 59
Query: 1654 cattcattcaaacgcttgtacaaaacatttcccg--ggcttgatgtgcccaaagagtt 1709
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 58 cattcattcaaacgcttgtacaaaacatttcccgaagacttgatgtgcccaaagagtt 1
>gnl|LJGI|AV410916 similar to UniRef100_A6ZRG2 Cluster: Cell wall integrity and stress
response component; n=1; Saccharomyces cerevisiae
YJM789|Rep: Cell wall integrity and stress response
component - Saccharomyces cerevisiae (strain YJM789)
(Baker's yeast), partial (4%)
Length = 256
Score = 507 bits (256), Expect = e-143
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 66 catttcccttgtttcttgctccctcccacttctccatcaaggtagcagcatcagcatcac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catttcccttgtttcttgctccctcccacttctccatcaaggtagcagcatcagcatcac 60
Query: 126 caccactagcaccaccaccgtgtcctctgatactacaaagcccaataatctcgacttcag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caccactagcaccaccaccgtgtcctctgatactacaaagcccaataatctcgacttcag 120
Query: 186 agacacccatttgatgaaagtcctcacccgttcctgcaaggcacgcatgtacaacgaatc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agacacccatttgatgaaagtcctcacccgttcctgcaaggcacgcatgtacaacgaatc 180
Query: 246 actctactttctccgccgcatggtcagcaagggttacaaacctgatgttgtaatctgcac 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actctactttctccgccgcatggtcagcaagggttacaaacctgatgttgtaatctgcac 240
Query: 306 caagatcatcaagggg 321
||||||||||||||||
Sbjct: 241 caagatcatcaagggg 256
>gnl|LJGI|TC60053 similar to UniRef100_A7QMW3 Cluster: Chromosome chr14 scaffold_128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_128, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 970
Score = 345 bits (174), Expect = 6e-94
Identities = 372/438 (84%)
Strand = Plus / Plus
Query: 1195 atctttgagaagctgggcgaagtgggttgtcctccaaatgtgagttcatacaacacattg 1254
|||| ||||||||| || |||||||||||||||||||||| |||||||| || ||| |
Sbjct: 177 atctctgagaagcttggtgaagtgggttgtcctccaaatgcaagttcatataatacaata 236
Query: 1255 ttcagtgcactctggagtagcgggcacaaaattagagccctggggatgattttggagatg 1314
|| ||||||| |||||||| || |||||||| |||| || |||||||||| ||||||
Sbjct: 237 tttggtgcactgtggagtagtggtgacaaaattcgagcattgaggatgattttagagatg 296
Query: 1315 ttaagcaaagatattgatcctgatgagatcacttataattcactcatatcttgtttgtgc 1374
|| ||| | |||||||||||||| |||||| ||||||||||| |||||||||||||||
Sbjct: 297 ttggacaagggtattgatcctgatgggatcacctataattcacttatatcttgtttgtgc 356
Query: 1375 agagatgcaatggtggatcaggccattgagttgttagtggacatggaaagtagtgtgtac 1434
||||||| | |||||||| |||| |||||||||||||||||||||||||||| |
Sbjct: 357 agagatggattggtggatgaggcagttgagttgttagtggacatggaaagtagcaagagt 416
Query: 1435 caaccttcagttattagttacaacattgttcttcttggattgagcaaagtgcacagaatc 1494
|||||||||||||| || ||||| ||||||||||| |||||| |||| ||||||||||||
Sbjct: 417 caaccttcagttatcagctacaatattgttcttctgggattgtgcaaggtgcacagaatc 476
Query: 1495 tccgatgccattgaggtgttagctgcgatggttgacaaagggtgtcggccaaatgaaact 1554
|| |||||||||||| ||||||| |||||||||||||| |||| |||||||||||||
Sbjct: 477 attgaagccattgaggtgctagctgccatggttgacaaaggatgtcagccaaatgaaact 536
Query: 1555 acttacacattgttggttgaagggattggttatgctggctggccagatgatgctatggag 1614
|| ||||| |||||||||||||||||||||| ||| || |||| | | ||||| ||| ||
Sbjct: 537 acatacactttgttggttgaagggattggttttgcgggatggcgaaacgatgcaatgcag 596
Query: 1615 ctagctatttcccttgtt 1632
|| || | ||||||||||
Sbjct: 597 ctggcgaattcccttgtt 614