Miyakogusa Predicted Gene

Lj0g3v0236869.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0236869.1 Non Chatacterized Hit- tr|F6GW90|F6GW90_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,57.69,3e-19,seg,NULL; GDHRDH,Glucose/ribitol dehydrogenase; no
description,NAD(P)-binding domain; NAD(P)-binding,38578_g.1
         (375 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP084345 weakly similar to UniRef100_Q2HVK6 Cluster: Sh...   400   e-111
gnl|LJGI|TC81069 weakly similar to UniRef100_A7PZ77 Cluster: Chr...   383   e-106
gnl|LJGI|BP028509 similar to UniRef100_A7PZ77 Cluster: Chromosom...   353   5e-97
gnl|LJGI|TC59941 weakly similar to UniRef100_A7PZ77 Cluster: Chr...   351   2e-96
gnl|LJGI|TC63326 similar to UniRef100_A7PZ77 Cluster: Chromosome...   327   3e-89

>gnl|LJGI|BP084345 weakly similar to UniRef100_Q2HVK6 Cluster: Short-chain
           dehydrogenase/reductase SDR; n=1; Medicago
           truncatula|Rep: Short-chain dehydrogenase/reductase SDR
           - Medicago truncatula (Barrel medic), partial (38%)
          Length = 366

 Score =  400 bits (202), Expect = e-111
 Identities = 290/318 (91%), Gaps = 1/318 (0%)
 Strand = Plus / Minus

                                                                       
Query: 59  cagttgatggagtattgatgaaatttctcaaagatttccaacaaggttcattagaaggaa 118
           |||| |||||||||||||  || ||||||||||||||||||||||||||||||||| | |
Sbjct: 345 cagtggatggagtattgaaaaagtttctcaaagatttccaacaaggttcattagaaagta 286

                                                                       
Query: 119 aagggtggcctaagattctcagtagctatattatgtctaaagctgctatgaatgcctaca 178
           |||||||||||||| || |||||  |||||||||||||||||||||||||||||||||||
Sbjct: 285 aagggtggcctaaggttttcagtgcctatattatgtctaaagctgctatgaatgcctaca 226

                                                                       
Query: 179 caagaattcttgccatgaaataccccactttcggcatcaacagtgtttgtcctggttatt 238
           ||||||||||||||| ||||||| |||||||| ||||||| |||||||| ||||| ||| 
Sbjct: 225 caagaattcttgccaggaaatacaccactttctgcatcaatagtgtttgccctggctatg 166

                                                                       
Query: 239 gcaagacagatataactaacaatactggtttgttaactgctgaagaaggtgc-tgctagc 297
             ||||||||| |||||||||||| |||||||||||||| |||||||||||| |||||| 
Sbjct: 165 tgaagacagatgtaactaacaataatggtttgttaactgttgaagaaggtgcttgctagt 106

                                                                       
Query: 298 cctgtgaagctagcactgcttcccaatggaagtccatctggcctcttctattccaggggt 357
           |||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 105 cctgtgaaactagcactgcttcccaatggaagtccatctggtctcttctatttcaggggt 46

                             
Query: 358 gaagtggcatccttttga 375
           |||||| |||||||||||
Sbjct: 45  gaagtgtcatccttttga 28


>gnl|LJGI|TC81069 weakly similar to UniRef100_A7PZ77 Cluster: Chromosome chr15
           scaffold_40, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr15 scaffold_40, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (49%)
          Length = 1221

 Score =  383 bits (193), Expect = e-106
 Identities = 289/321 (90%)
 Strand = Plus / Plus

                                                                       
Query: 55  gagacagttgatggagtattgatgaaatttctcaaagatttccaacaaggttcattagaa 114
           |||||||| |||||||||||||  || |||||| ||||||||||| | ||||||||||||
Sbjct: 121 gagacagtggatggagtattgaaaaagtttctccaagatttccaagatggttcattagaa 180

                                                                       
Query: 115 ggaaaagggtggcctaagattctcagtagctatattatgtctaaagctgctatgaatgcc 174
           || |||||||||||||||||| |||||  |||||||||||||||||||||||||||||||
Sbjct: 181 ggcaaagggtggcctaagattttcagtgcctatattatgtctaaagctgctatgaatgcc 240

                                                                       
Query: 175 tacacaagaattcttgccatgaaataccccactttcggcatcaacagtgtttgtcctggt 234
           || |||||||||||||||| |||||||||||||||| |||||||||||||||||||||| 
Sbjct: 241 tatacaagaattcttgccaggaaataccccactttctgcatcaacagtgtttgtcctggc 300

                                                                       
Query: 235 tattgcaagacagatataactaacaatactggtttgttaactgctgaagaaggtgctgct 294
           |    ||||||||||||||||  ||||| ||| |||||||||| ||||||||||||||||
Sbjct: 301 tgggtcaagacagatataactgccaataatggcttgttaactgttgaagaaggtgctgct 360

                                                                       
Query: 295 agccctgtgaagctagcactgcttcccaatggaagtccatctggcctcttctattccagg 354
           |  ||||||| |||||| ||||||||||||||||||||||||||||||||||||  | ||
Sbjct: 361 actcctgtgaggctagcgctgcttcccaatggaagtccatctggcctcttctatcaccgg 420

                                
Query: 355 ggtgaagtggcatccttttga 375
           ||||||||| |||||||||||
Sbjct: 421 ggtgaagtgtcatccttttga 441


>gnl|LJGI|BP028509 similar to UniRef100_A7PZ77 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (44%)
          Length = 551

 Score =  353 bits (178), Expect = 5e-97
 Identities = 282/317 (88%)
 Strand = Plus / Minus

                                                                       
Query: 59  cagttgatggagtattgatgaaatttctcaaagatttccaacaaggttcattagaaggaa 118
           |||| |||||||||||||  |  ||||||||||||||||||||||||||||||||| | |
Sbjct: 440 cagtggatggagtattgaaaaggtttctcaaagatttccaacaaggttcattagaaagta 381

                                                                       
Query: 119 aagggtggcctaagattctcagtagctatattatgtctaaagctgctatgaatgcctaca 178
           ||||||||||||||| | | |||   ||||||||||| |||||||||||||||||||| |
Sbjct: 380 aagggtggcctaagactttgagtgcatatattatgtccaaagctgctatgaatgcctata 321

                                                                       
Query: 179 caagaattcttgccatgaaataccccactttcggcatcaacagtgtttgtcctggttatt 238
           ||||||||||||||| |||||||||||||||| ||||||| |||||||| | ||||||||
Sbjct: 320 caagaattcttgccaggaaataccccactttctgcatcaatagtgtttgccntggttatt 261

                                                                       
Query: 239 gcaagacagatataactaacaatactggtttgttaactgctgaagaaggtgctgctagcc 298
           |||||||||||||||||  |||||  ||||| |||||||||||||||||||||||||| |
Sbjct: 260 gcaagacagatataactgtcaataacggtttcttaactgctgaagaaggtgctgctagtc 201

                                                                       
Query: 299 ctgtgaagctagcactgcttcccaatggaagtccatctggcctcttctattccaggggtg 358
           |||||| ||||||||||||||||  ||||||||||||||| |||||||||| || ||| |
Sbjct: 200 ctgtgaggctagcactgcttccccttggaagtccatctgggctcttctattacaagggag 141

                            
Query: 359 aagtggcatccttttga 375
           | ||| |||||||||||
Sbjct: 140 atgtgtcatccttttga 124


>gnl|LJGI|TC59941 weakly similar to UniRef100_A7PZ77 Cluster: Chromosome chr15
           scaffold_40, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr15 scaffold_40, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (90%)
          Length = 1086

 Score =  351 bits (177), Expect = 2e-96
 Identities = 285/321 (88%)
 Strand = Plus / Plus

                                                                       
Query: 55  gagacagttgatggagtattgatgaaatttctcaaagatttccaacaaggttcattagaa 114
           |||||| | |||||||||||||  || |||||||||||||| ||| ||||||||||||||
Sbjct: 617 gagacattggatggagtattgaaaaagtttctcaaagattttcaagaaggttcattagaa 676

                                                                       
Query: 115 ggaaaagggtggcctaagattctcagtagctatattatgtctaaagctgctatgaatgcc 174
            | || |||||||||||| || |||||  |||||| ||||| |||||| | || | ||||
Sbjct: 677 agtaatgggtggcctaagcttttcagtgcctatatcatgtcgaaagctaccataattgcc 736

                                                                       
Query: 175 tacacaagaattcttgccatgaaataccccactttcggcatcaacagtgtttgtcctggt 234
           || || ||||||||||||| |||||||||||||||| ||||||| |||||||| ||||||
Sbjct: 737 tatactagaattcttgccaggaaataccccactttcagcatcaatagtgtttgccctggt 796

                                                                       
Query: 235 tattgcaagacagatataactaacaatactggtttgttaactgctgaagaaggtgctgct 294
           |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||
Sbjct: 797 tattgcaagacagatataactgccaataatggtttgttaactgctgaagaaggtgctgct 856

                                                                       
Query: 295 agccctgtgaagctagcactgcttcccaatggaagtccatctggcctcttctattccagg 354
           |  ||||||||||||||||||||||| |||||||||||||||||| |||||||||||  |
Sbjct: 857 aatcctgtgaagctagcactgcttccaaatggaagtccatctggcttcttctattcccag 916

                                
Query: 355 ggtgaagtggcatccttttga 375
           ||||||||| |||||||||||
Sbjct: 917 ggtgaagtgtcatccttttga 937


>gnl|LJGI|TC63326 similar to UniRef100_A7PZ77 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (89%)
          Length = 1052

 Score =  327 bits (165), Expect = 3e-89
 Identities = 273/309 (88%)
 Strand = Plus / Plus

                                                                       
Query: 55  gagacagttgatggagtattgatgaaatttctcaaagatttccaacaaggttcattagaa 114
           |||||||| |||||||||||||  |  ||||| |||||||||||||||||||||||||||
Sbjct: 608 gagacagtggatggagtattgaaaaggtttctgaaagatttccaacaaggttcattagaa 667

                                                                       
Query: 115 ggaaaagggtggcctaagattctcagtagctatattatgtctaaagctgctatgaatgcc 174
            | ||||| |||||||||||| |||||  ||||||| |||||||||||||||||||||||
Sbjct: 668 agcaaaggttggcctaagattttcagtgcctatattgtgtctaaagctgctatgaatgcc 727

                                                                       
Query: 175 tacacaagaattcttgccatgaaataccccactttcggcatcaacagtgtttgtcctggt 234
           || |||||||||||||||| |||||||||||||||  ||||||| |||||||| ||||| 
Sbjct: 728 tatacaagaattcttgccaggaaataccccactttttgcatcaatagtgtttgccctgga 787

                                                                       
Query: 235 tattgcaagacagatataactaacaatactggtttgttaactgctgaagaaggtgctgct 294
           | |  ||||||||||||||||  ||||| ||| |||||||||| ||||||||||||||||
Sbjct: 788 tttgtcaagacagatataactgccaataatggcttgttaactgttgaagaaggtgctgct 847

                                                                       
Query: 295 agccctgtgaagctagcactgcttcccaatggaagtccatctggcctcttctattccagg 354
           || ||||| | |||||||||| |||| |||||||| ||||||||||||||||||  ||||
Sbjct: 848 agtcctgtaaggctagcactgtttcctaatggaagcccatctggcctcttctatcacagg 907

                    
Query: 355 ggtgaagtg 363
           |||||||||
Sbjct: 908 ggtgaagtg 916