Miyakogusa Predicted Gene

Lj0g3v0236339.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0236339.1 Non Chatacterized Hit- tr|I1J402|I1J402_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,62.76,0,Myb_DNA-binding,SANT/Myb domain; no
description,Homeodomain-like; MYB DNA BINDING / TRANSCRIPTION
FA,CUFF.15474.1
         (969 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72932 similar to UniRef100_A7NUE1 Cluster: Chromosome...   194   7e-49
gnl|LJGI|GO032081 homologue to UniRef100_Q09GS2 Cluster: Transcr...    68   1e-10

>gnl|LJGI|TC72932 similar to UniRef100_A7NUE1 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (45%)
          Length = 1107

 Score =  194 bits (98), Expect = 7e-49
 Identities = 287/350 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggcagggctccttgctgtgacaaagcgaacgtgaagaaaggtccatggtcgccagaa 60
           ||||| ||||||||||||||||||||||| ||||| || | ||| ||||||||||| |||
Sbjct: 85  atggggagggctccttgctgtgacaaagccaacgtcaaaagaggcccatggtcgcctgaa 144

                                                                       
Query: 61  gaagatgccaagctcaagtcctacatagatgaccatggcaccgggggcaactggattgct 120
           ||||||||||| |||||  | ||||| ||| ||||||| ||||| || ||||||||||| 
Sbjct: 145 gaagatgccaaactcaaagcttacatcgatcaccatggaaccggtggaaactggattgcc 204

                                                                       
Query: 121 ttgccacaaaagattggactgaagcgttgtggcaagagttgccgtctcaggtggctaaac 180
            ||||||||||||| || || ||| | ||||| || || || ||||| || ||||| || 
Sbjct: 205 ctgccacaaaagataggccttaagagatgtgggaaaagctgtcgtcttagatggctgaat 264

                                                                       
Query: 181 tatctacgccctaatctcaagcatggtggtttctccgaggaagaagacaacatcatttgt 240
           ||||| ||||| ||  | || ||||| |||||||| || ||||||||||||||||| || 
Sbjct: 265 tatcttcgcccaaacattaaacatgggggtttctcagaagaagaagacaacatcatctgc 324

                                                                       
Query: 241 agcctttacattagtattggaagcaggtggtcggtgattgcagctcaactgcccggaaga 300
           | ||| ||  ||||||||||||||||||||||  | || ||||| ||  | || ||  | 
Sbjct: 325 aacctctatgttagtattggaagcaggtggtctattatagcagcacagttacctgggcgc 384

                                                             
Query: 301 actaataatgacataaagaactactggaacacaaggctcaaaaagaagct 350
           ||  ||||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 385 acagataatgatataaagaactactggaacacaaggctgaagaagaagct 434


>gnl|LJGI|GO032081 homologue to UniRef100_Q09GS2 Cluster: Transcription factor MYBJ7;
           n=1; Glycine max|Rep: Transcription factor MYBJ7 -
           Glycine max (Soybean), partial (51%)
          Length = 653

 Score = 67.9 bits (34), Expect = 1e-10
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggcagggctccttgctgtgacaaagcgaacgtgaagaaaggtccatggtcgccagaa 60
           |||||||| ||||| |||||||||||||| || || |||| ||| |||||||| || |||
Sbjct: 204 atgggcagagctccatgctgtgacaaagcaaatgtaaagagagggccatggtctcctgaa 263

                         
Query: 61  gaagatgccaagct 74
           |||||||| |||||
Sbjct: 264 gaagatgcaaagct 277