Miyakogusa Predicted Gene
- Lj0g3v0236109.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0236109.1 Non Chatacterized Hit- tr|C5YS10|C5YS10_SORBI
Putative uncharacterized protein Sb08g021540
OS=Sorghu,26.17,1e-18,GUB_WAK_bind,Wall-associated receptor kinase
galacturonan-binding domain; seg,NULL,CUFF.15454.1
(945 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67252 650 0.0
>gnl|LJGI|TC67252
Length = 1456
Score = 650 bits (328), Expect = 0.0
Identities = 673/789 (85%), Gaps = 18/789 (2%)
Strand = Plus / Minus
Query: 20 catcttgcatgatcgttttgatcataatctccatgtctccatcggcatctgcccaacaag 79
|||||| ||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||
Sbjct: 1233 catcttacatgatcgttttgatcatagtctccatgtctccattggcatctgcacaactag 1174
Query: 80 attatccaaacacggtacatcccgattgtgattcaatatgtggagatgtaacgatcactt 139
|||||||| ||||||| ||||||||||| |||||| |||||||| ||| |||| | |
Sbjct: 1173 attatccagacacggtgaatcccgattgtaattcaagatgtggaggagtatggatcgcct 1114
Query: 140 accctttcggaatgggggatccaacgtgctacgcagacaaatggttcgaagttgagtgca 199
|||||||||||||||||||||||| ||||||||||||| ||||||||||| | || ||||
Sbjct: 1113 accctttcggaatgggggatccaaagtgctacgcagacgaatggttcgaaatagaatgca 1054
Query: 200 gaaacacctccc---aaggttcaacaccgtacataaaatcgataaacctggaagtaacat 256
|||||||||| | ||||||||| |||||| | |||| |||||||||||| |||||
Sbjct: 1053 gaaacacctctcgacaaggttcaaaaccgtaactgaaatggataaacctggagataacaa 994
Query: 257 caatgaatccaggaataagcaacgtggaagtcatgaaccctgttttccggtggaactgca 316
|| || ||||| ||| || || | ||||||| ||||||||||||||||||||||
Sbjct: 993 acatcgattcaggatcaagttacttgtacatcatgaagcctgttttccggtggaactgca 934
Query: 317 agaagagcagagattctaagccagtggtgaacctcacaggaagccctttcgtgtattcca 376
| |||||||| ||| ||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 933 acaagagcagtgatgctaagccagaggtgaatctcacaggaagccctttcgtgtattcca 874
Query: 377 aggattacaacaagttcattgccatcggctgcaacaagattgcgtttttgcaatcgaacg 436
||||| ||||||||||| |||||||||||||||||||| || | ||||||||||||||
Sbjct: 873 aggatcgcaacaagttcaccgccatcggctgcaacaagatggcatatttgcaatcgaacg 814
Query: 437 gatccaaagttagcggttgtgtctccctctgtgatcagtacgatgacagtgaggcgagca 496
||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 813 gatccaaagttagcggttgcgtctccctctgtgatcagtatgatgacagagaggcgagca 754
Query: 497 aaaacatctacgatagcgacaattgtcttggtaggctttgctgccaaaattcgcttccat 556
||||| | | |||| ||||||||||||||| |||||| | | ||| |||||||
Sbjct: 753 tcaacat---ggccaacgacggttgtcttggtaggctctgctgcgagacttcacttccat 697
Query: 557 cgtacctggtggaattcaacgtgacgcttgaagatctgaagagtaatgataatgagagtg 616
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 696 cgttcctggtggaattcaacgtgacgcttgaagatatgaagagtaatgataatgagagtg 637
Query: 617 gtggtggtggtgatggtgatcaatgcagtcaagcattgataggaacatgggattggaacg 676
| |||||||| ||||||||||| ||||| |||||| || ||||||||
Sbjct: 636 g------------tggtgatcggtgcagtcaagcgttgattggaacaaggaattggaaca 589
Query: 677 aggtatattttgggtctagttacgtgtacctaagcattcttgacctggatgtggattatg 736
|||||| || |||||| ||| ||| | |||||||||||||||||||| ||||||||
Sbjct: 588 gggtatacttggggtctgacaacgagtatcgaagcattcttgacctggatgaggattatg 529
Query: 737 ttcgcgccatgctttcatgggcagttttcaactcgtcatcgttcaagctaccttcagatg 796
||| || || ||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 528 ttctagcaatactttcatgggccgttttcaactcgtcatcgttcaagcgaccttcagatg 469
Query: 797 ctaactgca 805
|||||||||
Sbjct: 468 ctaactgca 460