Miyakogusa Predicted Gene
- Lj0g3v0235439.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0235439.1 Non Chatacterized Hit- tr|E0CRX4|E0CRX4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.1,6e-19,seg,NULL,CUFF.15408.1
(715 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81426 605 e-172
gnl|LJGI|TC72899 similar to UniRef100_A7NUL3 Cluster: Chromosome... 297 5e-80
>gnl|LJGI|TC81426
Length = 728
Score = 605 bits (305), Expect = e-172
Identities = 305/305 (100%)
Strand = Plus / Plus
Query: 1 atgaccccctctcccagtcaagtatttccagcaccctatagaaacccggtttggaatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atgaccccctctcccagtcaagtatttccagcaccctatagaaacccggtttggaatgga 483
Query: 61 cctagaggccctgctccctataacttcccattccatccatcaggtggtggtacctatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cctagaggccctgctccctataacttcccattccatccatcaggtggtggtacctatcca 543
Query: 121 aatcctagatttgaaccatcaagcagcccatcatataactacagacccagctatagtccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aatcctagatttgaaccatcaagcagcccatcatataactacagacccagctatagtccg 603
Query: 181 aatccttctccaggatacacgaacactccaagtcctagattcgaaccatcaagaagccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aatccttctccaggatacacgaacactccaagtcctagattcgaaccatcaagaagccca 663
Query: 241 tcatataactacaggcccaactatagtccgaatccttctccaggatacacgaacaatcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tcatataactacaggcccaactatagtccgaatccttctccaggatacacgaacaatcca 723
Query: 301 agccc 305
|||||
Sbjct: 724 agccc 728
Score = 147 bits (74), Expect = 1e-34
Identities = 95/102 (93%)
Strand = Plus / Plus
Query: 207 tccaagtcctagattcgaaccatcaagaagcccatcatataactacaggcccaactatag 266
||||| ||||||||| ||||||||||| |||||||||||||||||||| |||| ||||||
Sbjct: 540 tccaaatcctagatttgaaccatcaagcagcccatcatataactacagacccagctatag 599
Query: 267 tccgaatccttctccaggatacacgaacaatccaagccctag 308
||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 600 tccgaatccttctccaggatacacgaacactccaagtcctag 641
>gnl|LJGI|TC72899 similar to UniRef100_A7NUL3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 617
Score = 297 bits (150), Expect = 5e-80
Identities = 150/150 (100%)
Strand = Plus / Plus
Query: 566 agaattcaaaatcctggacttcaaagtcggtaagcacaaaaagggatggttcatctgctg 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 agaattcaaaatcctggacttcaaagtcggtaagcacaaaaagggatggttcatctgctg 167
Query: 626 ctcctgtcaagttcagttcggaaccaagccttgcagagtacttggcttctgcgctcaatg 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ctcctgtcaagttcagttcggaaccaagccttgcagagtacttggcttctgcgctcaatg 227
Query: 686 aagctgctgaaagtgcagaaaaagaatgat 715
||||||||||||||||||||||||||||||
Sbjct: 228 aagctgctgaaagtgcagaaaaagaatgat 257
Score = 103 bits (52), Expect = 1e-21
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 453 tgaagatccgtggaagtttttgcagcctgtaatatggaaggcagtgggtatttcttttaa 512
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagatccgtggaagttcctgcagcctgtaatatggaaggcagtgggtatttcttttaa 60