Miyakogusa Predicted Gene

Lj0g3v0234599.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0234599.1 tr|I7M395|I7M395_TETTS TPR Domain containing
protein OS=Tetrahymena thermophila (strain SB210)
GN=TT,20.6,5.4,coiled-coil,NULL; seg,NULL,CUFF.15337.1
         (1441 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61666 similar to UniRef100_Q7SCZ7 Cluster: WASP-inter...   125   8e-28

>gnl|LJGI|TC61666 similar to UniRef100_Q7SCZ7 Cluster: WASP-interacting protein-like
           protein vrp1p; n=1; Neurospora crassa|Rep:
           WASP-interacting protein-like protein vrp1p - Neurospora
           crassa, partial (5%)
          Length = 822

 Score =  125 bits (63), Expect = 8e-28
 Identities = 93/103 (90%)
 Strand = Plus / Minus

                                                                       
Query: 360 agagcgtgtagcggcggcggtatcgccagcgaatttggaaaccgcgacggagacagtttc 419
           |||||| |||||||||| ||||||||| | |||||||||||||||||||||||| | |||
Sbjct: 301 agagcgagtagcggcggaggtatcgccggtgaatttggaaaccgcgacggagaccgattc 242

                                                      
Query: 420 agcagtggtgaaggcgactcagaaatccattcttgaaacagag 462
           | | |||||| || |||||||||||||||||||||||||||||
Sbjct: 241 aacggtggtgcagtcgactcagaaatccattcttgaaacagag 199