Miyakogusa Predicted Gene
- Lj0g3v0234359.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0234359.2 tr|G2FP91|G2FP91_9FIRM 2Fe-2S iron-sulfur cluster
binding domain protein OS=Desulfosporosinus sp.
OT,50,0.48,seg,NULL,CUFF.15327.2
(305 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC599772 605 e-173
gnl|LJGI|TC67973 homologue to UniRef100_Q8VAG3 Cluster: Wsv453; ... 589 e-168
gnl|LJGI|TC80617 similar to UniRef100_Q1CWJ5 Cluster: ABC transp... 256 7e-68
gnl|LJGI|TC75993 weakly similar to UniRef100_Q16A71 Cluster: Pos... 54 5e-07
>gnl|LJGI|DC599772
Length = 547
Score = 605 bits (305), Expect = e-173
Identities = 305/305 (100%)
Strand = Plus / Plus
Query: 1 atgcctgcatcctcccaggtttcaatgtgccgccgccagaagccttcccggcgcctccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atgcctgcatcctcccaggtttcaatgtgccgccgccagaagccttcccggcgcctccct 121
Query: 61 tcaaccctgacattaactaatttgaatccatcaatctctggtttctatatcccccaaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tcaaccctgacattaactaatttgaatccatcaatctctggtttctatatcccccaaacc 181
Query: 121 ccagacgccccatccttttccccctcacgcctcaaccctttattccttcgcttgcaccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ccagacgccccatccttttccccctcacgcctcaaccctttattccttcgcttgcaccac 241
Query: 181 tcaattgattcatccgatctcttcatccgctcccagcctgatccagaagtcgtcttcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tcaattgattcatccgatctcttcatccgctcccagcctgatccagaagtcgtcttcctc 301
Query: 241 ctcgataaccttaaaaatatccaaaaccctatttctcttcctccttcttcatcttttatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctcgataaccttaaaaatatccaaaaccctatttctcttcctccttcttcatcttttatc 361
Query: 301 tgatc 305
|||||
Sbjct: 362 tgatc 366
>gnl|LJGI|TC67973 homologue to UniRef100_Q8VAG3 Cluster: Wsv453; n=1; Shrimp white
spot syndrome virus|Rep: Wsv453 - White spot syndrome
virus (WSSV), partial (11%)
Length = 786
Score = 589 bits (297), Expect = e-168
Identities = 303/305 (99%)
Strand = Plus / Plus
Query: 1 atgcctgcatcctcccaggtttcaatgtgccgccgccagaagccttcccggcgcctccct 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 46 atgcctgcatcctcccaggtttcaatgcgccgccgccagaagccttcccggcgcctccct 105
Query: 61 tcaaccctgacattaactaatttgaatccatcaatctctggtttctatatcccccaaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tcaaccctgacattaactaatttgaatccatcaatctctggtttctatatcccccaaacc 165
Query: 121 ccagacgccccatccttttccccctcacgcctcaaccctttattccttcgcttgcaccac 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 166 ccagacgccccatccttttccccctcacacctcaaccctttattccttcgcttgcaccac 225
Query: 181 tcaattgattcatccgatctcttcatccgctcccagcctgatccagaagtcgtcttcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tcaattgattcatccgatctcttcatccgctcccagcctgatccagaagtcgtcttcctc 285
Query: 241 ctcgataaccttaaaaatatccaaaaccctatttctcttcctccttcttcatcttttatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctcgataaccttaaaaatatccaaaaccctatttctcttcctccttcttcatcttttatc 345
Query: 301 tgatc 305
|||||
Sbjct: 346 tgatc 350
>gnl|LJGI|TC80617 similar to UniRef100_Q1CWJ5 Cluster: ABC transporter, permease
protein; n=1; Myxococcus xanthus DK 1622|Rep: ABC
transporter, permease protein - Myxococcus xanthus
(strain DK 1622), partial (3%)
Length = 922
Score = 256 bits (129), Expect = 7e-68
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 164 tccttcgcttgcaccactcaattgattcatccgatctcttcatccgctcccagcctgatc 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccttcgcttgcaccactcaattgattcatccgatctcttcatccgctcccagcctgatc 60
Query: 224 cagaagtcgtcttcctcctcgataaccttaaaaatatccaaaaccctatttctcttcctc 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagaagtcgtcttcctcctcgataaccttaaaaatatccaaaaccctatttctcttcctc 120
Query: 284 cttcttcat 292
|||||||||
Sbjct: 121 cttcttcat 129
>gnl|LJGI|TC75993 weakly similar to UniRef100_Q16A71 Cluster: Possible
trehalose/maltose binding; n=1; Roseobacter
denitrificans OCh 114|Rep: Possible trehalose/maltose
binding - Roseobacter denitrificans (strain ATCC 33942 /
OCh 114) (Erythrobactersp. (strain OCh 114))
(Roseobacter denitrificans), partial (4%)
Length = 1213
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 121 ccagacgccccatccttttccccctcacgcctcaa 155
|||| ||||||||||||||| ||||||||||||||
Sbjct: 281 ccagccgccccatccttttctccctcacgcctcaa 315