Miyakogusa Predicted Gene
- Lj0g3v0234009.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0234009.2 Non Chatacterized Hit- tr|B9TAY8|B9TAY8_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,28.9,0.000000000000001,RNI-like,NULL; F-box domain,F-box domain,
cyclin-like; no description,NULL; F-box,F-box domain,
cycl,CUFF.15331.2
(1656 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC592967 similar to UniRef100_A2Q6A7 Cluster: Cyclin-li... 900 0.0
gnl|LJGI|TC64199 weakly similar to UniRef100_A2Q6A7 Cluster: Cyc... 565 e-160
gnl|LJGI|TC58303 similar to UniRef100_A2Q6A7 Cluster: Cyclin-lik... 367 e-100
gnl|LJGI|BP062983 357 1e-97
gnl|LJGI|FS334626 similar to UniRef100_A2Q6A7 Cluster: Cyclin-li... 168 7e-41
>gnl|LJGI|DC592967 similar to UniRef100_A2Q6A7 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 566
Score = 900 bits (454), Expect = 0.0
Identities = 454/454 (100%)
Strand = Plus / Plus
Query: 1 atggatgatgatcatatatcagatttgcccataatcatcctccatgacattctgtcaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atggatgatgatcatatatcagatttgcccataatcatcctccatgacattctgtcaaga 172
Query: 61 ttgccggagaaagatgctgctagggcaagtgttttgtccaaagcgtgggcagaaacattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ttgccggagaaagatgctgctagggcaagtgttttgtccaaagcgtgggcagaaacattg 232
Query: 121 tctacgtttcccatcctatctttctctatttccaaaatgataggaatgtgttctctgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tctacgtttcccatcctatctttctctatttccaaaatgataggaatgtgttctctgaca 292
Query: 181 acggaagaagaattttccatgataagaaagaactttgttgattatgtgaagaaaacattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 acggaagaagaattttccatgataagaaagaactttgttgattatgtgaagaaaacattg 352
Query: 241 ctaaggtttcatgaccaaggcttagcaatcaaagagttacagctcaatgtggactgtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctaaggtttcatgaccaaggcttagcaatcaaagagttacagctcaatgtggactgtttt 412
Query: 301 gactttcattacatgtctcggcatgttgatctttggctgaaattggctgctgagagtggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gactttcattacatgtctcggcatgttgatctttggctgaaattggctgctgagagtggt 472
Query: 361 gttgaggtactggaactttgcctgccttatagatatgaactgaaagaggaaggtcggttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gttgaggtactggaactttgcctgccttatagatatgaactgaaagaggaaggtcggttg 532
Query: 421 tgttgctatgtgttgccaacaggtgttcttgaag 454
||||||||||||||||||||||||||||||||||
Sbjct: 533 tgttgctatgtgttgccaacaggtgttcttgaag 566
>gnl|LJGI|TC64199 weakly similar to UniRef100_A2Q6A7 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (17%)
Length = 781
Score = 565 bits (285), Expect = e-160
Identities = 465/525 (88%)
Strand = Plus / Plus
Query: 1132 agtcaactagaagtcaatgttgagatgtactttgatcatctagatctttctgacttgagg 1191
|||||||| |||||||| ||| ||||| | ||||||| || ||||||| | ||||||||
Sbjct: 1 agtcaactggaagtcaaagttatgatgttccttgatcacctggatctttgtaacttgagg 60
Query: 1192 gaatttatccaaaacttcaagcctcaaaatgttttggcatctctttccttatctatagat 1251
| |||| ||||||| ||||| |||| ||||| ||||||||| |||||| ||| ||| ||
Sbjct: 61 ggatttctccaaaatttcaaacctctaaatgctttggcatccctttccctatttatccat 120
Query: 1252 cagtcgattgtggatgaattcaacccaattgtcttgcaagattcatcccctccgccgatc 1311
||| || |||||||||||||||||||| |||||||||||||||||||| ||| |||||||
Sbjct: 121 cagccgtttgtggatgaattcaacccagttgtcttgcaagattcatcctctctgccgatc 180
Query: 1312 attaaacacttgaacctacaatctgttcctgaaaatgaaacattgttttggcctgttgtt 1371
|| |||| |||| |||||| |||||||| |||||||||| || |||||||||||||||
Sbjct: 181 atcaaactcttggacctacgctctgttccaaaaaatgaaactttcttttggcctgttgtt 240
Query: 1372 aatagtttactttcaagttgctgccctgaaactatttcgttgtgcttgcattcatattgc 1431
||||| |||||||||||||||||||| ||||||||| ||||| |||||||||| | || |
Sbjct: 241 aatagcttactttcaagttgctgcccagaaactattacgttgagcttgcattcttttttc 300
Query: 1432 tgcagcagagcattcattgagtttctctatgagacgcttgtgggcaggaaagagaacgac 1491
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 301 tgcagcagagcattcattgagtttttctatgagacgcttatgggcaggaaagagaacgac 360
Query: 1492 tgtttttgcagttctggtagtgccaagtgttggtggcatggactgaagggtgttaaaatc 1551
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 361 tgtttttgtagttctggtagtgccaagtgttggtggcatgggctgaagggtgttaaagtc 420
Query: 1552 acaaacactagcaataccgatgggaatgctgattttaagaccacgttagatgcgttgcca 1611
||||||||||| ||| | |||| |||| |||||||||||||| | ||||||||||||||
Sbjct: 421 acaaacactaggaatgctgatgacaatgttgattttaagaccatgctagatgcgttgcca 480
Query: 1612 acttggggagattttgacaatattatctttaggttggaattgtag 1656
||||||| | | |||||||||||||||||||||||||||||||
Sbjct: 481 acttgggcaattcatgacaatattatctttaggttggaattgtag 525
>gnl|LJGI|TC58303 similar to UniRef100_A2Q6A7 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (21%)
Length = 819
Score = 367 bits (185), Expect = e-100
Identities = 392/461 (85%)
Strand = Plus / Plus
Query: 218 ttgattatgtgaagaaaacattgctaaggtttcatgaccaaggcttagcaatcaaagagt 277
||||||||||||||| ||||||||| ||||| | |||||||| |||||| |||||||||
Sbjct: 331 ttgattatgtgaagagaacattgctgaggttccgtgaccaagtcttagcggtcaaagagt 390
Query: 278 tacagctcaatgtggactgttttgactttcattacatgtctcggcatgttgatctttggc 337
| ||||| |||| || |||||||| |||||||||||||| | ||||||||||||||
Sbjct: 391 ttaagctcggtgtgaacagttttgaccttcattacatgtctaaggatgttgatctttggt 450
Query: 338 tgaaattggctgctgagagtggtgttgaggtactggaactttgcctgccttatagatatg 397
|||| ||||||| ||||||||||||||||||||| | ||||||||||| ||||| ||
Sbjct: 451 tgaagttggctggcgagagtggtgttgaggtactgcaggtttgcctgcctgatagagctg 510
Query: 398 aactgaaagaggaaggtcggttgtgttgctatgtgttgccaacaggtgttcttgaagcca 457
| | | | | ||||| || | | ||||||||||||||| | ||||||||||||| | |
Sbjct: 511 atcaggatggggaagatcaggagctttgctatgtgttgccgataggtgttcttgaatcga 570
Query: 458 aatcacttaagaagttagtgttgaaggggggaatcttcgttgatcaagcattcatgaaac 517
| || ||||||||| | | ||||| |||||||||| |||||||| ||||||||||||
Sbjct: 571 agtcgcttaagaagatcgagttgatggggggaatccgcgttgatccagcattcatgaact 630
Query: 518 attcaatcaagtttttctcgttgcgagaactaacattgcggcgtgtccttctggaagatg 577
||||||||||||||||||||||||||||||| |||| || ||||||||||| |||||
Sbjct: 631 gttcaatcaagtttttctcgttgcgagaactatcattatggtctgtccttctgggagatg 690
Query: 578 agcaggtaatagagtatctcatttctcgctgccctttgattgaatatgtaactttaacgt 637
| |||| |||||||||||||||||||||||| |||||| |||||||||||||||| | ||
Sbjct: 691 aacaggcaatagagtatctcatttctcgctgtcctttgcttgaatatgtaactttgaagt 750
Query: 638 tctgttctgtgctgaaacctggtggagcaggaggcctgctt 678
|||||||||| |||| ||||||||||||||||||||||||
Sbjct: 751 gctgttctgtgttgaaccctggtggagcaggaggcctgctt 791
Score = 159 bits (80), Expect = 7e-38
Identities = 116/128 (90%)
Strand = Plus / Plus
Query: 8 atgatcatatatcagatttgcccataatcatcctccatgacattctgtcaagattgccgg 67
||||||||||||| || |||||| ||||||||| ||||||||||||||||| || |||
Sbjct: 124 atgatcatatatccaatctgcccagaatcatccttcatgacattctgtcaaggctgtcgg 183
Query: 68 agaaagatgctgctagggcaagtgttttgtccaaagcgtgggcagaaacattgtctacgt 127
||||||||||||||||| |||||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 184 agaaagatgctgctaggacaagtgttctgtccaaggcgtgggcagaaacatggtctacgt 243
Query: 128 ttcccatc 135
||||||||
Sbjct: 244 ttcccatc 251
>gnl|LJGI|BP062983
Length = 470
Score = 357 bits (180), Expect = 1e-97
Identities = 201/207 (97%), Gaps = 1/207 (0%)
Strand = Plus / Minus
Query: 1451 agtttctctatgagacgcttgtgggcaggaaagagaacgactgtttttgcagttctggta 1510
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 470 agtttctctatgagacgcttgtggncaggaaagagaacgactgtttttgccgttctggta 411
Query: 1511 gtgccaagtgttggtggcatggactgaagggtgttaaaatcacaaaca-ctagcaatacc 1569
||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||
Sbjct: 410 gtgccaagtgttggtggcatggactgaagggtgttaaaatcaccaacacctagccatacc 351
Query: 1570 gatgggaatgctgattttaagaccacgttagatgcgttgccaacttggggagattttgac 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gatgggaatgctgattttaagaccacgttagatgcgttgccaacttggggagattttgac 291
Query: 1630 aatattatctttaggttggaattgtag 1656
||||||||||||||||||||||||||
Sbjct: 290 catattatctttaggttggaattgtag 264
>gnl|LJGI|FS334626 similar to UniRef100_A2Q6A7 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (21%)
Length = 738
Score = 168 bits (85), Expect = 7e-41
Identities = 235/285 (82%)
Strand = Plus / Plus
Query: 218 ttgattatgtgaagaaaacattgctaaggtttcatgaccaaggcttagcaatcaaagagt 277
||||||||||||||| ||||||||| ||||| | |||||||| |||||| |||||||||
Sbjct: 351 ttgattatgtgaagagaacattgctgaggttccgtgaccaagtcttagcggtcaaagagt 410
Query: 278 tacagctcaatgtggactgttttgactttcattacatgtctcggcatgttgatctttggc 337
| ||||| |||| || |||||||| |||||||||||||| | |||||| ||||||
Sbjct: 411 ttaagctcggtgtgaacagttttgaccttcattacatgtctaaggatgttgcgctttggt 470
Query: 338 tgaaattggctgctgagagtggtgttgaggtactggaactttgcctgccttatagatatg 397
|||| ||||||| ||||||||||||||||||||| | ||||||||||| ||||| ||
Sbjct: 471 tgaagttggctggcgagagtggtgttgaggtactgcaggtttgcctgcctgatagagctg 530
Query: 398 aactgaaagaggaaggtcggttgtgttgctatgtgttgccaacaggtgttcttgaagcca 457
| | | | | |||||||| | | ||||||||||||||||| ||||||||||||| | |
Sbjct: 531 atcaggatggggaaggtcaggagctttgctatgtgttgccaataggtgttcttgaatcga 590
Query: 458 aatcacttaagaagttagtgttgaaggggggaatcttcgttgatc 502
| || ||||||||| | | ||||| |||||||||| ||||||||
Sbjct: 591 agtcgcttaagaagatcgagttgatggggggaatccgcgttgatc 635
Score = 159 bits (80), Expect = 7e-38
Identities = 116/128 (90%)
Strand = Plus / Plus
Query: 8 atgatcatatatcagatttgcccataatcatcctccatgacattctgtcaagattgccgg 67
||||||||||||| || |||||| ||||||||| ||||||||||||||||| || |||
Sbjct: 144 atgatcatatatccaatctgcccagaatcatccttcatgacattctgtcaaggctgtcgg 203
Query: 68 agaaagatgctgctagggcaagtgttttgtccaaagcgtgggcagaaacattgtctacgt 127
||||||||||||||||| |||||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 204 agaaagatgctgctaggacaagtgttctgtccaaggcgtgggcagaaacatggtctacgt 263
Query: 128 ttcccatc 135
||||||||
Sbjct: 264 ttcccatc 271
Score = 119 bits (60), Expect = 6e-26
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 591 gtatctcatttctcgctgccctttgattgaatatgtaactttaacgttctgttctgtgct 650
|||||||||||||||||| |||||| |||||||||||||||| | || |||||||||| |
Sbjct: 640 gtatctcatttctcgctgtcctttgcttgaatatgtaactttgaagtgctgttctgtgtt 699
Query: 651 gaaacctggtggagcaggaggcctgctt 678
||| ||||||||||||||||||||||||
Sbjct: 700 gaaccctggtggagcaggaggcctgctt 727