Miyakogusa Predicted Gene
- Lj0g3v0234009.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0234009.1 Non Chatacterized Hit- tr|I1MCX4|I1MCX4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39135
PE,27.71,2e-18,RNI-like,NULL; F-box domain,F-box domain, cyclin-like;
no description,NULL,CUFF.15331.1
(1599 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58303 similar to UniRef100_A2Q6A7 Cluster: Cyclin-lik... 1362 0.0
gnl|LJGI|FS334626 similar to UniRef100_A2Q6A7 Cluster: Cyclin-li... 950 0.0
gnl|LJGI|TC64199 weakly similar to UniRef100_A2Q6A7 Cluster: Cyc... 922 0.0
gnl|LJGI|DC592967 similar to UniRef100_A2Q6A7 Cluster: Cyclin-li... 167 3e-40
gnl|LJGI|BP062983 155 1e-36
>gnl|LJGI|TC58303 similar to UniRef100_A2Q6A7 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (21%)
Length = 819
Score = 1362 bits (687), Expect = 0.0
Identities = 699/703 (99%)
Strand = Plus / Plus
Query: 1 atggaccatgatcatatatccaatctgcccagaatcatccttcatgacattctgtcaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atggaccatgatcatatatccaatctgcccagaatcatccttcatgacattctgtcaagg 176
Query: 61 ctgtcggagaaagatgctgctaggacaagtgttctgtccaaggcgtgggcagaaacatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ctgtcggagaaagatgctgctaggacaagtgttctgtccaaggcgtgggcagaaacatgg 236
Query: 121 tctacgtttcccatcttgtccttctgtgacaccaagattgtaggaacgtttccccagccc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tctacgtttcccatcttgtccttctgtgacaccaagattgtaggaacgtttccccagcca 296
Query: 181 atgaaagattttttcaggaagagaagcctcttcattgattatgtgaagagaacattgctg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 297 atgaaagattttttcaggaagagaagactcttcattgattatgtgaagagaacattgctg 356
Query: 241 aggttccgtgaccaaggcttagcggtcaaagagtttaagctcggtgtgaacagttttgac 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aggttccgtgaccaagtcttagcggtcaaagagtttaagctcggtgtgaacagttttgac 416
Query: 301 cttcattacatgtctaaggatgttgatctttggttgaagttggctggcgagagtggtgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cttcattacatgtctaaggatgttgatctttggttgaagttggctggcgagagtggtgtt 476
Query: 361 gaggtactgcaggtttgcctgcctgatagagctgatcaggatggggaaggtcaggagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 477 gaggtactgcaggtttgcctgcctgatagagctgatcaggatggggaagatcaggagctt 536
Query: 421 tgctatgtgttgccgataggtgttcttgaatcgaagtcgcttaagaagatcgagttgatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tgctatgtgttgccgataggtgttcttgaatcgaagtcgcttaagaagatcgagttgatg 596
Query: 481 gggggaatccgcgttgatccagcattcatgaactgttcaatcaagtttttctcgttgcga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gggggaatccgcgttgatccagcattcatgaactgttcaatcaagtttttctcgttgcga 656
Query: 541 gaactatcattatggtctgtccttctgggagatgaacaggcaatagagtatctcatttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gaactatcattatggtctgtccttctgggagatgaacaggcaatagagtatctcatttct 716
Query: 601 cgctgtcctttgcttgaatatgtaactttgaagtgctgttctgtgttgaaccctggtgga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 cgctgtcctttgcttgaatatgtaactttgaagtgctgttctgtgttgaaccctggtgga 776
Query: 661 gcaggaggcctgcttgagtctaggacctgtcaaataaaatcta 703
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 gcaggaggcctgcttgagtctaggacctgtcaaataaaatcta 819
>gnl|LJGI|FS334626 similar to UniRef100_A2Q6A7 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (21%)
Length = 738
Score = 950 bits (479), Expect = 0.0
Identities = 497/503 (98%)
Strand = Plus / Plus
Query: 1 atggaccatgatcatatatccaatctgcccagaatcatccttcatgacattctgtcaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atggaccatgatcatatatccaatctgcccagaatcatccttcatgacattctgtcaagg 196
Query: 61 ctgtcggagaaagatgctgctaggacaagtgttctgtccaaggcgtgggcagaaacatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ctgtcggagaaagatgctgctaggacaagtgttctgtccaaggcgtgggcagaaacatgg 256
Query: 121 tctacgtttcccatcttgtccttctgtgacaccaagattgtaggaacgtttccccagccc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tctacgtttcccatcttgtccttctgtgacaccaagattgtaggaacgtttccccagcca 316
Query: 181 atgaaagattttttcaggaagagaagcctcttcattgattatgtgaagagaacattgctg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 317 atgaaagattttttcaggaagagaagactcttcattgattatgtgaagagaacattgctg 376
Query: 241 aggttccgtgaccaaggcttagcggtcaaagagtttaagctcggtgtgaacagttttgac 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aggttccgtgaccaagtcttagcggtcaaagagtttaagctcggtgtgaacagttttgac 436
Query: 301 cttcattacatgtctaaggatgttgatctttggttgaagttggctggcgagagtggtgtt 360
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 437 cttcattacatgtctaaggatgttgcgctttggttgaagttggctggcgagagtggtgtt 496
Query: 361 gaggtactgcaggtttgcctgcctgatagagctgatcaggatggggaaggtcaggagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gaggtactgcaggtttgcctgcctgatagagctgatcaggatggggaaggtcaggagctt 556
Query: 421 tgctatgtgttgccgataggtgttcttgaatcgaagtcgcttaagaagatcgagttgatg 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgctatgtgttgccaataggtgttcttgaatcgaagtcgcttaagaagatcgagttgatg 616
Query: 481 gggggaatccgcgttgatccagc 503
|||||||||||||||||||||||
Sbjct: 617 gggggaatccgcgttgatccagc 639
Score = 196 bits (99), Expect = 3e-49
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 588 gtatctcatttctcgctgtcctttgcttgaatatgtaactttgaagtgctgttctgtgtt 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gtatctcatttctcgctgtcctttgcttgaatatgtaactttgaagtgctgttctgtgtt 699
Query: 648 gaaccctggtggagcaggaggcctgcttgagtctaggac 686
|||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gaaccctggtggagcaggaggcctgcttgagtctaggac 738
>gnl|LJGI|TC64199 weakly similar to UniRef100_A2Q6A7 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (17%)
Length = 781
Score = 922 bits (465), Expect = 0.0
Identities = 465/465 (100%)
Strand = Plus / Plus
Query: 1135 agtcaactggaagtcaaagttatgatgttccttgatcacctggatctttgtaacttgagg 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtcaactggaagtcaaagttatgatgttccttgatcacctggatctttgtaacttgagg 60
Query: 1195 ggatttctccaaaatttcaaacctctaaatgctttggcatccctttccctatttatccat 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggatttctccaaaatttcaaacctctaaatgctttggcatccctttccctatttatccat 120
Query: 1255 cagccgtttgtggatgaattcaacccagttgtcttgcaagattcatcctctctgccgatc 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagccgtttgtggatgaattcaacccagttgtcttgcaagattcatcctctctgccgatc 180
Query: 1315 atcaaactcttggacctacgctctgttccaaaaaatgaaactttcttttggcctgttgtt 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcaaactcttggacctacgctctgttccaaaaaatgaaactttcttttggcctgttgtt 240
Query: 1375 aatagcttactttcaagttgctgcccagaaactattacgttgagcttgcattcttttttc 1434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatagcttactttcaagttgctgcccagaaactattacgttgagcttgcattcttttttc 300
Query: 1435 tgcagcagagcattcattgagtttttctatgagacgcttatgggcaggaaagagaacgac 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcagcagagcattcattgagtttttctatgagacgcttatgggcaggaaagagaacgac 360
Query: 1495 tgtttttgtagttctggtagtgccaagtgttggtggcatgggctgaagggtgttaaagtc 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtttttgtagttctggtagtgccaagtgttggtggcatgggctgaagggtgttaaagtc 420
Query: 1555 acaaacactaggaatgctgatgacaatgttgattttaagaccatg 1599
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaaacactaggaatgctgatgacaatgttgattttaagaccatg 465
>gnl|LJGI|DC592967 similar to UniRef100_A2Q6A7 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 566
Score = 167 bits (84), Expect = 3e-40
Identities = 198/236 (83%)
Strand = Plus / Plus
Query: 215 ttgattatgtgaagagaacattgctgaggttccgtgaccaaggcttagcggtcaaagagt 274
||||||||||||||| ||||||||| ||||| | ||||||||||||||| |||||||||
Sbjct: 330 ttgattatgtgaagaaaacattgctaaggtttcatgaccaaggcttagcaatcaaagagt 389
Query: 275 ttaagctcggtgtgaacagttttgaccttcattacatgtctaaggatgttgatctttggt 334
| ||||| |||| || |||||||| |||||||||||||| | ||||||||||||||
Sbjct: 390 tacagctcaatgtggactgttttgactttcattacatgtctcggcatgttgatctttggc 449
Query: 335 tgaagttggctggcgagagtggtgttgaggtactgcaggtttgcctgcctgatagagctg 394
|||| ||||||| ||||||||||||||||||||| | ||||||||||| ||||| ||
Sbjct: 450 tgaaattggctgctgagagtggtgttgaggtactggaactttgcctgccttatagatatg 509
Query: 395 atcaggatggggaaggtcaggagctttgctatgtgttgccgataggtgttcttgaa 450
| | | | | |||||||| | | ||||||||||||||| | |||||||||||||
Sbjct: 510 aactgaaagaggaaggtcggttgtgttgctatgtgttgccaacaggtgttcttgaa 565
Score = 159 bits (80), Expect = 7e-38
Identities = 116/128 (90%)
Strand = Plus / Plus
Query: 8 atgatcatatatccaatctgcccagaatcatccttcatgacattctgtcaaggctgtcgg 67
||||||||||||| || |||||| ||||||||| ||||||||||||||||| || |||
Sbjct: 120 atgatcatatatcagatttgcccataatcatcctccatgacattctgtcaagattgccgg 179
Query: 68 agaaagatgctgctaggacaagtgttctgtccaaggcgtgggcagaaacatggtctacgt 127
||||||||||||||||| |||||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 180 agaaagatgctgctagggcaagtgttttgtccaaagcgtgggcagaaacattgtctacgt 239
Query: 128 ttcccatc 135
||||||||
Sbjct: 240 ttcccatc 247
>gnl|LJGI|BP062983
Length = 470
Score = 155 bits (78), Expect = 1e-36
Identities = 101/109 (92%)
Strand = Plus / Minus
Query: 1454 agtttttctatgagacgcttatgggcaggaaagagaacgactgtttttgtagttctggta 1513
||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||
Sbjct: 470 agtttctctatgagacgcttgtggncaggaaagagaacgactgtttttgccgttctggta 411
Query: 1514 gtgccaagtgttggtggcatgggctgaagggtgttaaagtcacaaacac 1562
|||||||||||||||||||||| ||||||||||||||| |||| |||||
Sbjct: 410 gtgccaagtgttggtggcatggactgaagggtgttaaaatcaccaacac 362