Miyakogusa Predicted Gene
- Lj0g3v0233439.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0233439.1 tr|G7K7Q6|G7K7Q6_MEDTR Oligoribonuclease
OS=Medicago truncatula GN=MTR_5g088330 PE=4
SV=1,80.42,0,OLIGORIBONUCLEASE, MITOCHONDRIAL,NULL;
RNase_T,Exonuclease, RNase T/DNA polymerase III; no
descripti,CUFF.20834.1
(711 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80446 similar to UniRef100_A7PG21 Cluster: Chromosome... 1409 0.0
gnl|LJGI|BP075619 similar to UniRef100_A9SQJ2 Cluster: Predicted... 323 8e-88
gnl|LJGI|FS336719 similar to UniRef100_Q8L9Z5 Cluster: 4-coumara... 238 4e-62
>gnl|LJGI|TC80446 similar to UniRef100_A7PG21 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (94%)
Length = 846
Score = 1409 bits (711), Expect = 0.0
Identities = 711/711 (100%)
Strand = Plus / Plus
Query: 1 atggagaaccttgcaaactcgttttctgtgttggagcttgacgctgatgatagcgatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atggagaaccttgcaaactcgttttctgtgttggagcttgacgctgatgatagcgatgtt 63
Query: 61 cagcctcttcctacttccggtactactggcaagaaagttaatggcaaagctgacactccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 cagcctcttcctacttccggtactactggcaagaaagttaatggcaaagctgacactccg 123
Query: 121 ctggtaaacaccgataaacaagatccagaaaatccatacaagttacctcttgtttggatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ctggtaaacaccgataaacaagatccagaaaatccatacaagttacctcttgtttggatt 183
Query: 181 gacttggaaatgactggtttaaatattgaagtggatagaatactggagattgcttgcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gacttggaaatgactggtttaaatattgaagtggatagaatactggagattgcttgcata 243
Query: 241 attacagatggaaatttaaccaaaagcgtggagggtcctgatttggtcatccatcaaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 attacagatggaaatttaaccaaaagcgtggagggtcctgatttggtcatccatcaaact 303
Query: 301 aaggagtgccttgacaggatgggagagtggtgtcaaagtcatcatgcagctagcgggcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aaggagtgccttgacaggatgggagagtggtgtcaaagtcatcatgcagctagcgggcta 363
Query: 361 acaaaaagggtgcttgaaagtacaattagtgaaagagaagctgaaaagcaggttattgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 acaaaaagggtgcttgaaagtacaattagtgaaagagaagctgaaaagcaggttattgat 423
Query: 421 tttgtcaagaaacatgttggtaaatacacacctctcttggcaggaaattcaatatatgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tttgtcaagaaacatgttggtaaatacacacctctcttggcaggaaattcaatatatgtg 483
Query: 481 gatcttcaatatctgaagaaatacatgccagaattggcaggcctcttccctcatgtgctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gatcttcaatatctgaagaaatacatgccagaattggcaggcctcttccctcatgtgctc 543
Query: 541 gttgatgttagtagcgttaaagctctttgcatccgctggtatcctagagatcaaaagaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gttgatgttagtagcgttaaagctctttgcatccgctggtatcctagagatcaaaagaaa 603
Query: 601 gcacctataaaagaaaacaaacacagagcattggatgatatcagagaaagcattgaagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gcacctataaaagaaaacaaacacagagcattggatgatatcagagaaagcattgaagaa 663
Query: 661 cttagatactacaaggccaatattttcaagccaaagtcaaagaagtgatag 711
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cttagatactacaaggccaatattttcaagccaaagtcaaagaagtgatag 714
>gnl|LJGI|BP075619 similar to UniRef100_A9SQJ2 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(20%)
Length = 409
Score = 323 bits (163), Expect = 8e-88
Identities = 231/247 (93%), Gaps = 5/247 (2%)
Strand = Plus / Minus
Query: 470 caatatatgtggatcttcaatatctgaagaaatacatgcca-gaa-ttggcaggcctc-t 526
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
Sbjct: 409 caatatatgtggatcttcaatatctgaagaaatacatgccacgaacttggcaggcctcct 350
Query: 527 tccctcatgtgctcgttgatgttagtagcgttaaagctctttgcatccgctggtatccta 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tccctcatgtgctcgttgatgttagtagcgttaaagctctttgcatccgctggtatccta 290
Query: 587 gagatcaaaagaaagcacctata-aaagaaaacaaacacagag-cattggatgatatcag 644
||||||||||| ||||||||||| ||||||||||||| | ||| | ||||||||||||||
Sbjct: 289 gagatcaaaagcaagcacctatacaaagaaaacaaaccccgagcccttggatgatatcag 230
Query: 645 agaaagcattgaagaacttagatactacaaggccaatattttcaagccaaagtcaaagaa 704
|||||||||||||||||||||||||||| |||||| | |||||||| ||||| |||||
Sbjct: 229 agaaagcattgaagaacttagatactaccaggccatactcttcaagcccaagtccaagaa 170
Query: 705 gtgatag 711
|||||||
Sbjct: 169 gtgatag 163
>gnl|LJGI|FS336719 similar to UniRef100_Q8L9Z5 Cluster: 4-coumarate-CoA ligase-like
protein; n=1; Arabidopsis thaliana|Rep: 4-coumarate-CoA
ligase-like protein - Arabidopsis thaliana (Mouse-ear
cress), partial (20%)
Length = 586
Score = 238 bits (120), Expect = 4e-62
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 1 atggagaaccttgcaaactcgttttctgtgttggagcttgacgctgatgatagcgatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 atggagaaccttgcaaactcgttttctgtgttggagcttgacgctgatgatagcgatgtt 151
Query: 61 cagcctcttcctacttccggtactactggcaagaaagttaatggcaaagctgacactccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 cagcctcttcctacttccggtactactggcaagaaagttaatggcaaagctgacactccg 211