Miyakogusa Predicted Gene

Lj0g3v0232319.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0232319.1 Non Chatacterized Hit- tr|G8A099|G8A099_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,79.47,0,no
description,ATPase-like, ATP-binding domain; ATPase domain of HSP90
chaperone/DNA topoisomerase I,CUFF.15232.1
         (1803 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV407490 weakly similar to UniRef100_A7PHM9 Cluster: Ch...   771   0.0  

>gnl|LJGI|AV407490 weakly similar to UniRef100_A7PHM9 Cluster: Chromosome chr17
            scaffold_16, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 403

 Score =  771 bits (389), Expect = 0.0
 Identities = 400/403 (99%), Gaps = 3/403 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1143 tgaagctcccgtttccagtttgactcagatgttcagattccttcctattgagagttctcc 1202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tgaagctcccgtttccagtttgactcagatgttcagattccttcctattgagagttctcc 60

                                                                        
Query: 1203 at---atgagaagttaaaccatgtcagagaccaaataaaagcaaaacttcttgaagaagc 1259
            ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   atcatatgagaagttaaaccatgtcagagaccaaataaaagcaaaacttcttgaagaagc 120

                                                                        
Query: 1260 tattgttcctattgagacatacacgaagcagaagcacttctacaagcctcgcgaagttgg 1319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tattgttcctattgagacatacacgaagcagaagcacttctacaagcctcgcgaagttgg 180

                                                                        
Query: 1320 caggttactgcctgaattctggaatattttgagtaaggctcgatcggaacaagtatactt 1379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  caggttactgcctgaattctggaatattttgagtaaggctcgatcggaacaagtatactt 240

                                                                        
Query: 1380 gcttgacctgtcttctcatgatgggaggaaaatcttgagttctgcatttgacagaagcgt 1439
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gcttgacctgtcttctcatgatgggaggaaaatcttgagttctgcatttgacagaagcgt 300

                                                                        
Query: 1440 gtatgaccgcatactcaattttttagaggtgaaaccagtcaatgttgattggtatgcaaa 1499
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gtatgaccgcatactcaattttttagaggtgaaaccagtcaatgttgattggtatgcaaa 360

                                                       
Query: 1500 gtgcatccagagctctaatcttgtagatggagtgtctgaagag 1542
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gtgcatccagagctctaatcttgtagatggagtgtctgaagag 403