Miyakogusa Predicted Gene

Lj0g3v0231609.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0231609.1 Non Chatacterized Hit- tr|I1IKE3|I1IKE3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,32.84,3e-19,seg,NULL,CUFF.15186.1
         (595 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67198 weakly similar to UniRef100_A7PQD6 Cluster: Chr...   694   0.0  
gnl|LJGI|TC74055 weakly similar to UniRef100_A7QM04 Cluster: Chr...   216   1e-55

>gnl|LJGI|TC67198 weakly similar to UniRef100_A7PQD6 Cluster: Chromosome chr18
           scaffold_24, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (22%)
          Length = 726

 Score =  694 bits (350), Expect = 0.0
 Identities = 350/350 (100%)
 Strand = Plus / Plus

                                                                       
Query: 246 aagcaccgccgccgccgccttccaattcgtcaaaaacaacgccgccaacgtaaaatccgc 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aagcaccgccgccgccgccttccaattcgtcaaaaacaacgccgccaacgtaaaatccgc 304

                                                                       
Query: 306 cctcaccaacatctcaaaaacctcctccatcaaagccatgatcatggacctcttctgcaa 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cctcaccaacatctcaaaaacctcctccatcaaagccatgatcatggacctcttctgcaa 364

                                                                       
Query: 366 ctccgccaccgaaccagcctcctccatgggaatccctgtctactacttcctcccctccgg 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctccgccaccgaaccagcctcctccatgggaatccctgtctactacttcctcccctccgg 424

                                                                       
Query: 426 agccgccgttctagcactctactcctacttcccccaactccaccgccaaaccacggcgtc 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 agccgccgttctagcactctactcctacttcccccaactccaccgccaaaccacggcgtc 484

                                                                       
Query: 486 gttcaaggacatgcccggcgtggagctccgtgtccccggaaactcgccgctgatggcacc 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gttcaaggacatgcccggcgtggagctccgtgtccccggaaactcgccgctgatggcacc 544

                                                             
Query: 546 gcagatgccgggaccgattgtgaacagagaggatcctgcttactgggaga 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gcagatgccgggaccgattgtgaacagagaggatcctgcttactgggaga 594



 Score =  167 bits (84), Expect = 1e-40
 Identities = 84/84 (100%)
 Strand = Plus / Plus

                                                                      
Query: 2  tggaagcaacatcaatagtgctgtatccagcactaggcataggccacatagtctccatgg 61
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tggaagcaacatcaatagtgctgtatccagcactaggcataggccacatagtctccatgg 60

                                  
Query: 62 tggagctagccaagcacatcctaa 85
          ||||||||||||||||||||||||
Sbjct: 61 tggagctagccaagcacatcctaa 84


>gnl|LJGI|TC74055 weakly similar to UniRef100_A7QM04 Cluster: Chromosome chr18
           scaffold_122, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_122, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (17%)
          Length = 794

 Score =  216 bits (109), Expect = 1e-55
 Identities = 259/309 (83%)
 Strand = Plus / Plus

                                                                       
Query: 253 gccgccgccgccttccaattcgtcaaaaacaacgccgccaacgtaaaatccgccctcacc 312
           |||||| |||||||||| ||| |||||| |||| ||  ||||||  ||||| ||||||||
Sbjct: 295 gccgccaccgccttccagttcatcaaaaccaacaccttcaacgtccaatccaccctcacc 354

                                                                       
Query: 313 aacatctcaaaaacctcctccatcaaagccatgatcatggacctcttctgcaactccgcc 372
           || |||||  || ||||| ||||||||||| | ||||| |||||||||||||  ||||||
Sbjct: 355 aaaatctcccaatcctccaccatcaaagccctcatcatcgacctcttctgcacttccgcc 414

                                                                       
Query: 373 accgaaccagcctcctccatgggaatccctgtctactacttcctcccctccggagccgcc 432
           |  ||| | || |||||||| |||||||| |||||||||||| || ||||||| ||||||
Sbjct: 415 atggaagccgcttcctccattggaatccccgtctactacttcttcacctccggcgccgcc 474

                                                                       
Query: 433 gttctagcactctactcctacttcccccaactccaccgccaaaccacggcgtcgttcaag 492
           | | |||||||||||||||||||||| ||| |||| |||||||||||||||||||| | |
Sbjct: 475 gatttagcactctactcctacttcccacaaatccatcgccaaaccacggcgtcgtttagg 534

                                                                       
Query: 493 gacatgcccggcgtggagctccgtgtccccggaaactcgccgctgatggcaccgcagatg 552
           |||||| |||| |||||||| |||| ||| || ||| ||||| ||| ||| |  ||||||
Sbjct: 535 gacatggccggagtggagcttcgtgccccggggaacgcgccggtgaaggcgcgtcagatg 594

                    
Query: 553 ccgggaccg 561
           |||| ||||
Sbjct: 595 ccggaaccg 603



 Score = 75.8 bits (38), Expect = 3e-13
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                     
Query: 14  caatagtgctgtatccagcactaggcataggccacatagtctccatggtggagctagc 71
           |||| ||| |||||||||||| |||||||||||||||||| | |||||||||||||||
Sbjct: 68  caatcgtgttgtatccagcaccaggcataggccacatagtttgcatggtggagctagc 125