Miyakogusa Predicted Gene

Lj0g3v0231079.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0231079.1 CUFF.15113.1
         (319 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78006 similar to UniRef100_A7PVM2 Cluster: Chromosome...   440   e-123

>gnl|LJGI|TC78006 similar to UniRef100_A7PVM2 Cluster: Chromosome chr9 scaffold_33,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_33, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 663

 Score =  440 bits (222), Expect = e-123
 Identities = 236/243 (97%)
 Strand = Plus / Minus

                                                                       
Query: 77  aacactatatcattcaatgtgctattctctctacttgctctacaatgagtttgtctgtac 136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aacactatatcattcaatgtgctattctctctacttgctctacaatgagtttgtctgtac 340

                                                                       
Query: 137 agaaacagcaaacatggagatggggtcatattcctctcatatacgcctcagaaaattacc 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 agaaacagcaaacatggagatggggtcatattcctctcatatacgcctcagaaaattacc 280

                                                                       
Query: 197 tgtctgccaatcatcacttaggagacactgtgaatgtgcaaagtgctaacnnnnnnngtc 256
           ||||||||||||||||||||||||||||||||||||||||||||||||||       |||
Sbjct: 279 tgtctgccaatcatcacttaggagacactgtgaatgtgcaaagtgctaacaaaaaaagtc 220

                                                                       
Query: 257 tcaactttatctgtgggaggactggtaattttcttcactggtcttcttgttatgatgtgt 316
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tcaactttatctgtgggaggactggtaattttcttcactggtcttcttgttatgatgtgt 160

              
Query: 317 aat 319
           |||
Sbjct: 159 aat 157



 Score =  113 bits (57), Expect = 7e-25
 Identities = 57/57 (100%)
 Strand = Plus / Minus

                                                                    
Query: 20  atggggtcatattcctctcatatacgcctcagaaaattacctgtctgccaatcatca 76
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atggggtcatattcctctcatatacgcctcagaaaattacctgtctgccaatcatca 264